Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N14
         (905 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   146   3e-35
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   146   3e-35
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   146   3e-35
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   146   3e-35
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   146   3e-35
AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-P...    32   1.2  

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  146 bits (355), Expect = 3e-35
 Identities = 68/87 (78%), Positives = 76/87 (87%)
 Frame = +1

Query: 316 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 495
           RWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLRRRTYRAHGRINPYMS
Sbjct: 82  RWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMS 141

Query: 496 SPCHIEVCLSEREDAVARVAPTDDAPA 576
           SPCH+EV L+E+E+ V++   TDD PA
Sbjct: 142 SPCHVEVILTEKEELVSKA--TDDEPA 166



 Score =  107 bits (256), Expect = 3e-23
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +3

Query: 141 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQG 314
           VHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQG
Sbjct: 24  VHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQG 81



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +2

Query: 71  MGRYSREPDNPAKSCKARGSNLR 139
           MGRYSRE DN AKSCKARG NLR
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLR 23


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  146 bits (355), Expect = 3e-35
 Identities = 68/87 (78%), Positives = 76/87 (87%)
 Frame = +1

Query: 316 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 495
           RWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLRRRTYRAHGRINPYMS
Sbjct: 82  RWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMS 141

Query: 496 SPCHIEVCLSEREDAVARVAPTDDAPA 576
           SPCH+EV L+E+E+ V++   TDD PA
Sbjct: 142 SPCHVEVILTEKEELVSKA--TDDEPA 166



 Score =  107 bits (256), Expect = 3e-23
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +3

Query: 141 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQG 314
           VHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQG
Sbjct: 24  VHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQG 81



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +2

Query: 71  MGRYSREPDNPAKSCKARGSNLR 139
           MGRYSRE DN AKSCKARG NLR
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLR 23


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  146 bits (355), Expect = 3e-35
 Identities = 68/87 (78%), Positives = 76/87 (87%)
 Frame = +1

Query: 316 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 495
           RWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLRRRTYRAHGRINPYMS
Sbjct: 82  RWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMS 141

Query: 496 SPCHIEVCLSEREDAVARVAPTDDAPA 576
           SPCH+EV L+E+E+ V++   TDD PA
Sbjct: 142 SPCHVEVILTEKEELVSKA--TDDEPA 166



 Score =  107 bits (256), Expect = 3e-23
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +3

Query: 141 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQG 314
           VHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQG
Sbjct: 24  VHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQG 81



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +2

Query: 71  MGRYSREPDNPAKSCKARGSNLR 139
           MGRYSRE DN AKSCKARG NLR
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLR 23


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  146 bits (355), Expect = 3e-35
 Identities = 68/87 (78%), Positives = 76/87 (87%)
 Frame = +1

Query: 316 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 495
           RWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLRRRTYRAHGRINPYMS
Sbjct: 82  RWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMS 141

Query: 496 SPCHIEVCLSEREDAVARVAPTDDAPA 576
           SPCH+EV L+E+E+ V++   TDD PA
Sbjct: 142 SPCHVEVILTEKEELVSKA--TDDEPA 166



 Score =  107 bits (256), Expect = 3e-23
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +3

Query: 141 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQG 314
           VHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQG
Sbjct: 24  VHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQG 81



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +2

Query: 71  MGRYSREPDNPAKSCKARGSNLR 139
           MGRYSRE DN AKSCKARG NLR
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLR 23


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  146 bits (355), Expect = 3e-35
 Identities = 68/87 (78%), Positives = 76/87 (87%)
 Frame = +1

Query: 316 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 495
           RWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLRRRTYRAHGRINPYMS
Sbjct: 82  RWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMS 141

Query: 496 SPCHIEVCLSEREDAVARVAPTDDAPA 576
           SPCH+EV L+E+E+ V++   TDD PA
Sbjct: 142 SPCHVEVILTEKEELVSKA--TDDEPA 166



 Score =  107 bits (256), Expect = 3e-23
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +3

Query: 141 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQG 314
           VHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQG
Sbjct: 24  VHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQG 81



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +2

Query: 71  MGRYSREPDNPAKSCKARGSNLR 139
           MGRYSRE DN AKSCKARG NLR
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLR 23


>AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-PA
           protein.
          Length = 1491

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = -1

Query: 665 CINLLFNPYVYSLIIFSF*RASFFLESFFFAGASSVGATLATASSRSL 522
           C+  +F  Y++SL++F     +FF+ SFF    S+V AT+    S +L
Sbjct: 98  CLMTIFLVYIHSLVLF-----AFFISSFFSRSLSAVVATILMYFSTAL 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,523,721
Number of Sequences: 53049
Number of extensions: 615320
Number of successful extensions: 1611
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)