Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N11
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0050 - 536390-537231,538108-538375                               30   3.0  
03_02_0598 + 9727112-9727315,9727544-9727631,9728550-9728758,972...    28   9.0  

>04_01_0050 - 536390-537231,538108-538375
          Length = 369

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = +2

Query: 338 NYQMPLSFFQPTTPTRLINWTKSMGINLKATDSICQFHFKEEHIKMYDKIKIGEVI 505
           N  +    F    P R++ WT   GI       +   H + EH+ ++  IK   ++
Sbjct: 107 NGSLDRQLFPKEKPGRILGWTTRYGIVTDIAAGLHYVHHEHEHMVLHRDIKASNIL 162


>03_02_0598 +
           9727112-9727315,9727544-9727631,9728550-9728758,
           9728850-9728996,9729338-9729385
          Length = 231

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 112 LDYLHKCSRVIDGLTCLLII*FLMYSDIY 198
           LD+LH C  +   + C L+  FL++ DIY
Sbjct: 154 LDFLHYCVTLTSEMNCSLV--FLIHEDIY 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,932,185
Number of Sequences: 37544
Number of extensions: 204285
Number of successful extensions: 378
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)