Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N10
         (916 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81522-5|CAD98731.1|  663|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z81522-4|CAB04233.1|  771|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z68882-7|CAD89727.1|  292|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z68882-6|CAA93107.3|  406|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z68882-5|CAD89726.1|  407|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z68882-4|CAD89728.1|  338|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>Z81522-5|CAD98731.1|  663|Caenorhabditis elegans Hypothetical
           protein F32B4.4b protein.
          Length = 663

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 713 HGEEPPPERFPASCCSRNRGLSSP 642
           H +EPPP R P    SR RG S P
Sbjct: 307 HRDEPPPRRAPQEQPSRRRGASPP 330


>Z81522-4|CAB04233.1|  771|Caenorhabditis elegans Hypothetical
           protein F32B4.4a protein.
          Length = 771

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 713 HGEEPPPERFPASCCSRNRGLSSP 642
           H +EPPP R P    SR RG S P
Sbjct: 415 HRDEPPPRRAPQEQPSRRRGASPP 438


>AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical
           protein C08G5.6 protein.
          Length = 306

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -1

Query: 136 RIGRDKRTRKQENKEPNIVSYSTKTSDSTKIL 41
           R GR ++TR   N +PNIVS ST   ++  IL
Sbjct: 171 RSGRRRQTRADANLQPNIVSKSTLIQENCFIL 202


>Z68882-7|CAD89727.1|  292|Caenorhabditis elegans Hypothetical
           protein C47E12.4d protein.
          Length = 292

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 602 EYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPHGSRLSSPRIIHE 748
           E+ F   F  NR+ A+ + D  N  W+ + +E  P   +    P  +H+
Sbjct: 211 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 258


>Z68882-6|CAA93107.3|  406|Caenorhabditis elegans Hypothetical
           protein C47E12.4c protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 602 EYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPHGSRLSSPRIIHE 748
           E+ F   F  NR+ A+ + D  N  W+ + +E  P   +    P  +H+
Sbjct: 325 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 372


>Z68882-5|CAD89726.1|  407|Caenorhabditis elegans Hypothetical
           protein C47E12.4b protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 602 EYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPHGSRLSSPRIIHE 748
           E+ F   F  NR+ A+ + D  N  W+ + +E  P   +    P  +H+
Sbjct: 326 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 373


>Z68882-4|CAD89728.1|  338|Caenorhabditis elegans Hypothetical
           protein C47E12.4a protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 602 EYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPHGSRLSSPRIIHE 748
           E+ F   F  NR+ A+ + D  N  W+ + +E  P   +    P  +H+
Sbjct: 257 EFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,803,638
Number of Sequences: 27780
Number of extensions: 410563
Number of successful extensions: 1171
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)