Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N09
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118662-1|AAM50031.1|  642|Drosophila melanogaster SD10038p pro...   175   9e-44
AF289995-1|AAG02460.1|  642|Drosophila melanogaster thyroid horm...   175   9e-44
AF244916-1|AAF63336.1|  642|Drosophila melanogaster mediator tra...   175   9e-44
AE014297-2456|AAF55506.1|  642|Drosophila melanogaster CG7957-PA...   175   9e-44
BT023905-1|ABA81839.1| 2753|Drosophila melanogaster GH18167p pro...    30   3.7  
AJ544075-1|CAD66435.1| 2935|Drosophila melanogaster zormin protein.    30   3.7  
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD...    30   3.7  
AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB...    30   3.7  
AE014296-408|AAF47606.3| 2946|Drosophila melanogaster CG33484-PA...    30   3.7  
AE014296-407|ABI31229.1| 2947|Drosophila melanogaster CG33484-PC...    30   3.7  

>AY118662-1|AAM50031.1|  642|Drosophila melanogaster SD10038p
           protein.
          Length = 642

 Score =  175 bits (425), Expect = 9e-44
 Identities = 87/168 (51%), Positives = 119/168 (70%)
 Frame = +2

Query: 293 MANSVNISIEAPIENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKE 472
           M+NSVNIS+E   ENQI+EI YDG E+YQ P ++SE+LA+ A +IDFSKT  +  ++KKE
Sbjct: 1   MSNSVNISVETTCENQIREIGYDGTELYQPPPTLSESLAKCAARIDFSKTSLD--DLKKE 58

Query: 473 GESSSDTKSDEDNKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPV 652
            E S+   +DED     +Q SLWPWD+VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+
Sbjct: 59  -EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPL 117

Query: 653 QPEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASETMRMARNMPD 796
             E  +++P+VQVY RKK           G ERLR + + +  RN+ D
Sbjct: 118 LEEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSD 165


>AF289995-1|AAG02460.1|  642|Drosophila melanogaster thyroid hormone
           receptor-associatedprotein TRAP80 protein.
          Length = 642

 Score =  175 bits (425), Expect = 9e-44
 Identities = 87/168 (51%), Positives = 119/168 (70%)
 Frame = +2

Query: 293 MANSVNISIEAPIENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKE 472
           M+NSVNIS+E   ENQI+EI YDG E+YQ P ++SE+LA+ A +IDFSKT  +  ++KKE
Sbjct: 1   MSNSVNISVETTCENQIREIGYDGTELYQPPPTLSESLAKCAARIDFSKTSLD--DLKKE 58

Query: 473 GESSSDTKSDEDNKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPV 652
            E S+   +DED     +Q SLWPWD+VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+
Sbjct: 59  -EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPL 117

Query: 653 QPEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASETMRMARNMPD 796
             E  +++P+VQVY RKK           G ERLR + + +  RN+ D
Sbjct: 118 LEEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSD 165


>AF244916-1|AAF63336.1|  642|Drosophila melanogaster mediator
           transcriptional cofactorTRAP80 protein.
          Length = 642

 Score =  175 bits (425), Expect = 9e-44
 Identities = 87/168 (51%), Positives = 119/168 (70%)
 Frame = +2

Query: 293 MANSVNISIEAPIENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKE 472
           M+NSVNIS+E   ENQI+EI YDG E+YQ P ++SE+LA+ A +IDFSKT  +  ++KKE
Sbjct: 1   MSNSVNISVETTCENQIREIGYDGTELYQPPPTLSESLAKCAARIDFSKTSLD--DLKKE 58

Query: 473 GESSSDTKSDEDNKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPV 652
            E S+   +DED     +Q SLWPWD+VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+
Sbjct: 59  -EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPL 117

Query: 653 QPEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASETMRMARNMPD 796
             E  +++P+VQVY RKK           G ERLR + + +  RN+ D
Sbjct: 118 LEEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSD 165


>AE014297-2456|AAF55506.1|  642|Drosophila melanogaster CG7957-PA
           protein.
          Length = 642

 Score =  175 bits (425), Expect = 9e-44
 Identities = 87/168 (51%), Positives = 119/168 (70%)
 Frame = +2

Query: 293 MANSVNISIEAPIENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKE 472
           M+NSVNIS+E   ENQI+EI YDG E+YQ P ++SE+LA+ A +IDFSKT  +  ++KKE
Sbjct: 1   MSNSVNISVETTCENQIREIGYDGTELYQPPPTLSESLAKCAARIDFSKTSLD--DLKKE 58

Query: 473 GESSSDTKSDEDNKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPV 652
            E S+   +DED     +Q SLWPWD+VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+
Sbjct: 59  -EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPL 117

Query: 653 QPEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASETMRMARNMPD 796
             E  +++P+VQVY RKK           G ERLR + + +  RN+ D
Sbjct: 118 LEEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSD 165


>BT023905-1|ABA81839.1| 2753|Drosophila melanogaster GH18167p
           protein.
          Length = 2753

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 23/96 (23%), Positives = 45/96 (46%)
 Frame = +2

Query: 329 IENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKEGESSSDTKSDED 508
           ++ ++  I YD + + ++ +   EN+ +L ++ID     D F   +KE  S +D    E 
Sbjct: 662 LKAKLDGIKYDYRTLVESVIQFLENIVQLRREID-----DYFARQQKEPASGADRSIAEH 716

Query: 509 NKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNI 616
            K +         D   +K RS +T+  +L D + +
Sbjct: 717 EKFR---------DQCMDKFRSLITQSELLIDRVRV 743


>AJ544075-1|CAD66435.1| 2935|Drosophila melanogaster zormin protein.
          Length = 2935

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 23/96 (23%), Positives = 45/96 (46%)
 Frame = +2

Query: 329  IENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKEGESSSDTKSDED 508
            ++ ++  I YD + + ++ +   EN+ +L ++ID     D F   +KE  S +D    E 
Sbjct: 844  LKAKLDGIKYDYRTLVESVIQFLENIVQLRREID-----DYFARQQKEPASGADRSIAEH 898

Query: 509  NKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNI 616
             K +         D   +K RS +T+  +L D + +
Sbjct: 899  EKFR---------DQCMDKFRSLITQSELLIDRVRV 925


>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
            isoform D protein.
          Length = 3651

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 23/96 (23%), Positives = 45/96 (46%)
 Frame = +2

Query: 329  IENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKEGESSSDTKSDED 508
            ++ ++  I YD + + ++ +   EN+ +L ++ID     D F   +KE  S +D    E 
Sbjct: 855  LKAKLDGIKYDYRTLVESVIQFLENIVQLRREID-----DYFARQQKEPASGADRSIAEH 909

Query: 509  NKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNI 616
             K +         D   +K RS +T+  +L D + +
Sbjct: 910  EKFR---------DQCMDKFRSLITQSELLIDRVRV 936


>AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB,
            isoform B protein.
          Length = 3090

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 23/96 (23%), Positives = 45/96 (46%)
 Frame = +2

Query: 329  IENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKEGESSSDTKSDED 508
            ++ ++  I YD + + ++ +   EN+ +L ++ID     D F   +KE  S +D    E 
Sbjct: 855  LKAKLDGIKYDYRTLVESVIQFLENIVQLRREID-----DYFARQQKEPASGADRSIAEH 909

Query: 509  NKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNI 616
             K +         D   +K RS +T+  +L D + +
Sbjct: 910  EKFR---------DQCMDKFRSLITQSELLIDRVRV 936


>AE014296-408|AAF47606.3| 2946|Drosophila melanogaster CG33484-PA,
            isoform A protein.
          Length = 2946

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 23/96 (23%), Positives = 45/96 (46%)
 Frame = +2

Query: 329  IENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKEGESSSDTKSDED 508
            ++ ++  I YD + + ++ +   EN+ +L ++ID     D F   +KE  S +D    E 
Sbjct: 855  LKAKLDGIKYDYRTLVESVIQFLENIVQLRREID-----DYFARQQKEPASGADRSIAEH 909

Query: 509  NKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNI 616
             K +         D   +K RS +T+  +L D + +
Sbjct: 910  EKFR---------DQCMDKFRSLITQSELLIDRVRV 936


>AE014296-407|ABI31229.1| 2947|Drosophila melanogaster CG33484-PC,
            isoform C protein.
          Length = 2947

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 23/96 (23%), Positives = 45/96 (46%)
 Frame = +2

Query: 329  IENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTEDEFCNVKKEGESSSDTKSDED 508
            ++ ++  I YD + + ++ +   EN+ +L ++ID     D F   +KE  S +D    E 
Sbjct: 855  LKAKLDGIKYDYRTLVESVIQFLENIVQLRREID-----DYFARQQKEPASGADRSIAEH 909

Query: 509  NKDQSYQSSLWPWDSVRNKLRSALTEVSVLADVLNI 616
             K +         D   +K RS +T+  +L D + +
Sbjct: 910  EKFR---------DQCMDKFRSLITQSELLIDRVRV 936


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,746,694
Number of Sequences: 53049
Number of extensions: 575735
Number of successful extensions: 2069
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)