Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N07
         (939 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    30   3.1  
01_01_0082 + 625198-625719                                             30   3.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   7.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.3  
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365...    28   9.3  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +3

Query: 519 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 665
           CWR  +        T  D Q    +    +KD    P + PSC L+F P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 331


>01_01_0082 + 625198-625719
          Length = 173

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +2

Query: 626 PPGSSLVRSPVPTLPLTDTCPPFSFGKRGXXXXXXXXXXXXXR-RPAGW-CQPRQPTWLS 799
           PP    V  P PT P T+ CPP  +G  G                P+GW   P  P++L+
Sbjct: 75  PPSPPPVAYPPPTTPSTN-CPPPPYGGGGYNPTPSYNPTPGYNPTPSGWFTPPNMPSYLT 133


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 351 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 506
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>05_01_0462 -
           3658153-3658290,3658394-3658540,3658622-3658720,
           3658802-3659253,3659597-3660280,3662072-3662180
          Length = 542

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 629 PGSSLVRSPVPTLPLTDTCPPFSFG 703
           P S+ + +PVPTLP++    PF+ G
Sbjct: 282 PQSTNISAPVPTLPISCDSAPFAHG 306


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,793,337
Number of Sequences: 37544
Number of extensions: 417652
Number of successful extensions: 1300
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)