Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N05
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607...    29   4.1  
10_01_0006 + 74000-76441                                               29   7.1  

>12_01_1069 -
           11060045-11060262,11060404-11060545,11060624-11060776,
           11060942-11061013,11062774-11063082,11063323-11063378,
           11066436-11066533,11066616-11066700,11066800-11067001,
           11067471-11067542,11069555-11069624,11071829-11072038,
           11072337-11072609,11073912-11074183,11075354-11075557
          Length = 811

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 335 NFSIHKDQTQNVLWRIKNGELDHVDPKV 418
           N   HK++TQN +W  +NGE+ + +P V
Sbjct: 734 NLDNHKEKTQNTVWE-ENGEVANDEPAV 760


>10_01_0006 + 74000-76441
          Length = 813

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 469 YFFSSIFYIICSNMNNYNFRINMVQLSIFYAPKNILSLIFVNTKIE 332
           Y F  +   I S   NY FR + V    +Y PK     ++V  +I+
Sbjct: 697 YSFGMVLLEIVSGRRNYGFRQDSVGSEDWYFPKWAFEKVYVERRID 742


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,781,090
Number of Sequences: 37544
Number of extensions: 287631
Number of successful extensions: 599
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)