Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N05
         (945 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   5.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   5.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   5.3  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   7.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 2   TVSITDLTIGNP*DLTFLTTLGVHSRYLIAKQNIFLLV 115
           T+ I DLT  +  D+T+ T L V     I K  + + +
Sbjct: 95  TLPIEDLTKSDNEDITYPTVLEVQLNLPILKDGVQIFI 132


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 2   TVSITDLTIGNP*DLTFLTTLGVHSRYLIAKQNIFLLV 115
           T+ I DLT  +  D+T+ T L V     I K  + + +
Sbjct: 133 TLPIEDLTKSDNEDITYPTVLEVQLNLPILKDGVQIFI 170


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 391 SIFYAPKNILSLIFVNTK 338
           +++Y+P +  SL +VNTK
Sbjct: 265 NLYYSPLSSRSLYYVNTK 282


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 562 ILTPWQKTR*YNIGRRMFLPDCFDNFYN 479
           I+  W++ R + I    F+PD     YN
Sbjct: 218 IVYSWEQNRSWRITHSYFMPDPLAGDYN 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,931
Number of Sequences: 438
Number of extensions: 3785
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)