Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_N02
(993 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 36 0.050
12_02_1174 - 26696869-26698191 33 0.27
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.47
01_05_0490 + 22672241-22674679 33 0.47
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 32 0.62
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 23 2.2
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 30 3.3
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 30 3.3
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 30 3.3
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 3.3
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 27 4.9
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 7.6
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 35.9 bits (79), Expect = 0.050
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -2
Query: 818 PPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP PPPPPP K PPPP
Sbjct: 635 PPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPP 692
>12_02_1174 - 26696869-26698191
Length = 440
Score = 33.5 bits (73), Expect = 0.27
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = -2
Query: 818 PPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPP 648
PPPPPP + PPPPPP + K PPP
Sbjct: 158 PPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPP 214
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/60 (26%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = -2
Query: 818 PPPPPPKXK---KXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPP 648
PPPPPP+ + + PPPPPP + K PPP
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPP 183
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/58 (25%), Positives = 17/58 (29%)
Frame = -2
Query: 818 PPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP + PPPPP + K PPP
Sbjct: 157 PPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPP 214
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.47
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 818 PPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP K PPPPPP K PPPP
Sbjct: 314 PPPPPP--KPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Score = 31.9 bits (69), Expect = 0.82
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPPPP K G PPPPPP G KK PPP
Sbjct: 326 PPPPPPP--KAAPPPPPPKGPPPPPPAKG--PPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 818 PPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPPXX 639
PPPPPPK PPPPP KK PPPP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPP----PPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Query: 638 K 636
K
Sbjct: 383 K 383
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPPXXXXXXXXXXXKKKKXXRPPP 644
PPPPPP K PPPPPP PPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 722 PPPPPPXXXXXXXXXXKKKKKXPPPPXXK 636
PPPPPP K PPPP K
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPK 342
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPPPP+ G PPPPPP G K + PP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPK----GPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
>01_05_0490 + 22672241-22674679
Length = 812
Score = 32.7 bits (71), Expect = 0.47
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = -2
Query: 818 PPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP PPPPPP + PPPP
Sbjct: 610 PPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRPAPPPP 667
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPP 706
PPPPPPQ + PPPPPP
Sbjct: 665 PPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPLPPPPPP 702
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/59 (25%), Positives = 16/59 (27%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPPPP PPPPPP + PPP
Sbjct: 609 PPPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRPAPPPP 667
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 32.3 bits (70), Expect = 0.62
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 722 PPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP KK++ PPPP
Sbjct: 171 PPPPPPPAPEPEPEPPKKEEPQPPPP 196
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 23.0 bits (47), Expect(3) = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 730 GXPPPPPP 707
G PPPPPP
Sbjct: 124 GHPPPPPP 131
Score = 23.0 bits (47), Expect(3) = 2.2
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -3
Query: 724 PPPPPPXXXXXXXXXXXKKKKXXRPPP 644
PPPPPP + + PPP
Sbjct: 129 PPPPPPPFKGDHYGGVYQNWQQNGPPP 155
Score = 21.0 bits (42), Expect(3) = 2.2
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 817 PPPPPP 800
PPPPPP
Sbjct: 111 PPPPPP 116
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPP 706
PPPPPPQ + PPPPPP
Sbjct: 11 PPPPPPQLEASGSDPDDPLLRDRVVVIAPPPPPPPPPP 48
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP G PPPPPP
Sbjct: 217 PPPPPPQADPSVELLVNFRHGLKVETNGLAPPPPPPP 253
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPP 706
PPPPPP G PPPPPP
Sbjct: 310 PPPPPPPPPMPRSRSASPSPSTSSSGSAGPPAPPPPPP 347
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPP 706
PPPPP GG PPPPPP
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPP 310
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 26.6 bits (56), Expect(2) = 4.9
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -2
Query: 722 PPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP + PPPP
Sbjct: 270 PPPPPPPMPPRTDNASTQAAPAPPPP 295
Score = 21.0 bits (42), Expect(2) = 4.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 818 PPPPPP 801
PPPPPP
Sbjct: 265 PPPPPP 270
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 722 PPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP K PPPP
Sbjct: 352 PPPPPPPPPPPPPPKLNTAPKPPPPP 377
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,623,949
Number of Sequences: 37544
Number of extensions: 817321
Number of successful extensions: 18658
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10017
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2905255520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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