Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N02
         (993 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   1.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   2.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 735 GGXXPPPPPPXG 700
           G   PPPPPP G
Sbjct: 526 GPLGPPPPPPPG 537



 Score = 23.0 bits (47), Expect(2) = 1.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 723 PPPPPPXG 700
           PPPPPP G
Sbjct: 531 PPPPPPGG 538



 Score = 21.4 bits (43), Expect(2) = 1.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 735 GGXXPPPPPP 706
           GG   PPPPP
Sbjct: 525 GGPLGPPPPP 534


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 736 GGGXPPPPPP 707
           G G PPPPPP
Sbjct: 779 GIGSPPPPPP 788



 Score = 22.2 bits (45), Expect(2) = 2.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 829 GXXXPPPPPP 800
           G   PPPPPP
Sbjct: 779 GIGSPPPPPP 788



 Score = 21.0 bits (42), Expect(2) = 2.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 724 PPPPPP 707
           PPPPPP
Sbjct: 786 PPPPPP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,027
Number of Sequences: 2352
Number of extensions: 13461
Number of successful extensions: 61
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108941235
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)