Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_N02
(993 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.24
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.24
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.73
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.73
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.73
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.96
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 3.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 3.5
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 25 4.2
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 25 4.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 6.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.0
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP + GG PPPPPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXG----GGXPPPPPP 707
PPPPPP + G GG PPPPPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP + GG PPPPPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXG----GGXPPPPPP 707
PPPPPP + G GG PPPPPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.73
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPPP GG PPPPPP G PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = -3
Query: 817 PPPPPP--XKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP GG PPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.73
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPPP GG PPPPPP G PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = -3
Query: 817 PPPPPP--XKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP GG PPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.73
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPPP GG PPPPPP G PPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = -3
Query: 817 PPPPPP--XKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP GG PPPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.96
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXG 700
PPPPPP + GG PPPPPP G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPML--GGPPPPPPPPGG 598
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/62 (24%), Positives = 18/62 (29%)
Frame = -2
Query: 830 GXXXPPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPP 651
G PPPPP + PPPPP ++ PP
Sbjct: 70 GTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPP 129
Query: 650 PP 645
PP
Sbjct: 130 PP 131
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/58 (25%), Positives = 17/58 (29%)
Frame = -1
Query: 816 PPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPPP + G PPPPP G + PPP
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 131
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/57 (24%), Positives = 17/57 (29%)
Frame = -2
Query: 815 PPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPP + PPPPP ++ PPPP
Sbjct: 106 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 162
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/57 (24%), Positives = 17/57 (29%)
Frame = -2
Query: 815 PPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPP + PPPPP ++ PPPP
Sbjct: 137 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPP 193
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/57 (24%), Positives = 17/57 (29%)
Frame = -2
Query: 815 PPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPP + PPPPP ++ PPPP
Sbjct: 168 PPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPP 224
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
P PPPP G G PPPPPP
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPP 706
PPPPPP K PPPPPP
Sbjct: 1358 PPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
P PPPP G G PPPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
P PPPP G G PPPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.0 bits (52), Expect(2) = 3.4
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 5/43 (11%)
Frame = -1
Query: 819 PPPPPPQXK-----KXXXXXXXXXXXXXXXXXXGGXXPPPPPP 706
PPPPPPQ G PPPPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 23.0 bits (47), Expect(2) = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 723 PPPPPPXG 700
PPPPPP G
Sbjct: 652 PPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 5/43 (11%)
Frame = -1
Query: 819 PPPPPPQXK-----KXXXXXXXXXXXXXXXXXXGGXXPPPPPP 706
PPPPPPQ G PPPPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 723 PPPPPPXG 700
PPPPPP G
Sbjct: 478 PPPPPPSG 485
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 25.4 bits (53), Expect(2) = 4.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 733 GGXPPPPPP 707
GG PPPPPP
Sbjct: 1010 GGPPPPPPP 1018
Score = 22.2 bits (45), Expect(2) = 4.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 829 GXXXPPPPPP 800
G PPPPPP
Sbjct: 1008 GPGGPPPPPP 1017
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 25.4 bits (53), Expect(2) = 4.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 733 GGXPPPPPP 707
GG PPPPPP
Sbjct: 249 GGPPPPPPP 257
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 829 GXXXPPPPPP 800
G PPPPPP
Sbjct: 247 GPGGPPPPPP 256
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 722 PPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPPP + ++ PPPP
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPP 53
Score = 24.2 bits (50), Expect(2) = 6.0
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -2
Query: 722 PPPPPPXXXXXXXXXXKKKKKXPPPP 645
PPPPP ++ PPPP
Sbjct: 29 PPPPPKPAPYVEQSAQPQQTAPPPPP 54
Score = 23.0 bits (47), Expect(2) = 6.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 818 PPPPPPK 798
PPPPPPK
Sbjct: 28 PPPPPPK 34
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = -1
Query: 819 PPPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXGXXXXXXXXXKKKKXXAPPP 643
PPPP P GG PPPP P K PPP
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP 579
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -1
Query: 816 PPPPPQXKKXXXXXXXXXXXXXXXXXXGGXXPPPPPPXG 700
PPPPP G PPPPPP G
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/62 (24%), Positives = 17/62 (27%)
Frame = -2
Query: 830 GXXXPPPPPPKXKKXXXXXXXXXXXXXXXXXXXGXXPPPPPPXXXXXXXXXXKKKKKXPP 651
G PPPPPP+ + PP PP PP
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
Query: 650 PP 645
PP
Sbjct: 195 PP 196
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP + G PPPPP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP + G PPPPP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = -3
Query: 817 PPPPPPXKKXXXXXXXXXXXXXXXXXXGGGXPPPPPP 707
PPPPPP + G PPPPP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,687,907
Number of Sequences: 27780
Number of extensions: 371827
Number of successful extensions: 6151
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3276
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2594635024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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