Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_M23
         (1126 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.1  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    21   9.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.5  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 1028 PPPPPPPXFXXGXGG 984
            PPPPPPP      GG
Sbjct: 784  PPPPPPPPSSLSPGG 798



 Score = 25.0 bits (52), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 509 GXXPPXPPPPP 477
           G  PP PPPPP
Sbjct: 781 GSPPPPPPPPP 791



 Score = 23.8 bits (49), Expect = 9.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 1028 PPPPPPP 1008
            PPPPPPP
Sbjct: 783  PPPPPPP 789


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 3.1
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = +3

Query: 405 PXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPP 512
           P   P    PPPPP          G  GG     PP
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 25.0 bits (52), Expect = 4.1
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +3

Query: 429 APPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
           APPPPP          GG  GG     P  P
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 23.8 bits (49), Expect = 9.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 512 GGXXPPXPPPPP 477
           GG   P PPPPP
Sbjct: 525 GGPLGPPPPPPP 536



 Score = 23.8 bits (49), Expect = 9.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 1028 PPPPPPP 1008
            PPPPPPP
Sbjct: 530  PPPPPPP 536


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 21.0 bits (42), Expect(2) = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 432 PPPPPXXKXKXXXXXGGGGGG 494
           PP     + K     GGGGGG
Sbjct: 379 PPLVTSEEEKKLLTVGGGGGG 399



 Score = 20.6 bits (41), Expect(2) = 9.2
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 477 GGGGGGXXXXPPXXPP 524
           GGGGGG        PP
Sbjct: 395 GGGGGGDGGSDGKKPP 410


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -3

Query: 524 GGXXGGXXPPXPPPPPXXXXXFXFXXGGGGGGPPXG 417
           GG   G   P  PP P          GG  GGPP G
Sbjct: 288 GGMPSGMVGPPRPPMPMQ--------GGAPGGPPQG 315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,201
Number of Sequences: 2352
Number of extensions: 13904
Number of successful extensions: 91
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 127029591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)