Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M23
(1126 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.092
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.092
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.092
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.16
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.16
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.16
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.37
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.37
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.85
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 31 1.5
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.5
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 31 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 2.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 2.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 6.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.0
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 6.0
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.0
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 29 7.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 7.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 7.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 7.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 7.9
AL110487-17|CAB54422.2| 135|Caenorhabditis elegans Hypothetical... 29 7.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 7.9
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 7.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 7.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 7.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 7.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPP 524
G PP SPP P G+PPPPP G PP PP
Sbjct: 253 GSPPPPPAAGSPPP--PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPP----PPP 446
GG PP SPP P G+PP PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPP 524
G PP SPP G+PPPPP K + G PP P
Sbjct: 310 GSLPPPQAGGSPPPAGT--GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 359
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
PP K SPP G+PPPPP G PP P
Sbjct: 240 PPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPP 524
G PP SPP P G+PPPPP G PP PP
Sbjct: 274 GSPPPPPAAGSPPP--PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPP----PPP 446
GG PP SPP P G+PP PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPP 524
G PP SPP G+PPPPP K + G PP P
Sbjct: 331 GSLPPPQAGGSPPPAGT--GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 380
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
PP K SPP G+PPPPP G PP P
Sbjct: 261 PPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPP 524
G PP SPP P G+PPPPP G PP PP
Sbjct: 259 GSPPPPPAAGSPPP--PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPP----PPP 446
GG PP SPP P G+PP PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 369 GGDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPP 524
G PP SPP G+PPPPP K + G PP P
Sbjct: 316 GSLPPPQAGGSPPPAGT--GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 365
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
PP K SPP G+PPPPP G PP P
Sbjct: 246 PPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +3
Query: 372 GDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPP 512
G PP PP P G PPPPP GG GG PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPP------PPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 782 GGGGXXPPPXXXXKKKXXPPPPPP 711
GG PPP K PPPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 512 GGXXPPXPPPPPXXXXXFXFXXGGGGGGPP 423
GG PP PPPPP GG GGPP
Sbjct: 766 GGCPPPPPPPPP----------GGFKGGPP 785
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 776 GGXXPPPXXXXKKKXXPPPPPP 711
GG PPP PPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP 732
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 776 GGXXPPPXXXXKKKXXPPPPPP 711
GG PPP PPPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPP 777
Score = 24.2 bits (50), Expect(2) = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 1025 PPPPPPXFXXGXGGG 981
PPPPPP G GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1028 PPPPPPP 1008
PPPPPPP
Sbjct: 759 PPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +3
Query: 372 GDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPP 512
G PP PP P G PPPPP GG GG PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPP------PPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 782 GGGGXXPPPXXXXKKKXXPPPPPP 711
GG PPP K PPPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 512 GGXXPPXPPPPPXXXXXFXFXXGGGGGGPP 423
GG PP PPPPP GG GGPP
Sbjct: 766 GGCPPPPPPPPP----------GGFKGGPP 785
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 776 GGXXPPPXXXXKKKXXPPPPPP 711
GG PPP PPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP 732
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 776 GGXXPPPXXXXKKKXXPPPPPP 711
GG PPP PPPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPP 777
Score = 24.2 bits (50), Expect(2) = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 1025 PPPPPPXFXXGXGGG 981
PPPPPP G GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1028 PPPPPPP 1008
PPPPPPP
Sbjct: 759 PPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +3
Query: 372 GDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPP 512
G PP PP P G PPPPP GG GG PP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPP------PPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 782 GGGGXXPPPXXXXKKKXXPPPPPP 711
GG PPP K PPPPPP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 512 GGXXPPXPPPPPXXXXXFXFXXGGGGGGPP 423
GG PP PPPPP GG GGPP
Sbjct: 349 GGCPPPPPPPPP----------GGFKGGPP 368
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 776 GGXXPPPXXXXKKKXXPPPPPP 711
GG PPP PPPPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPP 315
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 776 GGXXPPPXXXXKKKXXPPPPPP 711
GG PPP PPPPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPP 360
Score = 24.2 bits (50), Expect(2) = 3.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 1025 PPPPPPXFXXGXGGG 981
PPPPPP G GG
Sbjct: 352 PPPPPPPPPGGFKGG 366
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1028 PPPPPPP 1008
PPPPPPP
Sbjct: 342 PPPPPPP 348
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.37
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 4/88 (4%)
Frame = +2
Query: 233 PGXLGNFTPPXEKRFLPXNPFFXGXKKPXPXXXXXXXXXXXXXXXXXXXP----XXGKKF 400
P G F PP F P P F G P P P G +
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 401 PPXFXXPXGGPPPPPXFXXKXXXXXXGG 484
PP F PPPPP F GG
Sbjct: 350 PPFF------PPPPPHFMRPSSPPTDGG 371
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.37
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 4/88 (4%)
Frame = +2
Query: 233 PGXLGNFTPPXEKRFLPXNPFFXGXKKPXPXXXXXXXXXXXXXXXXXXXP----XXGKKF 400
P G F PP F P P F G P P P G +
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 401 PPXFXXPXGGPPPPPXFXXKXXXXXXGG 484
PP F PPPPP F GG
Sbjct: 350 PPFF------PPPPPHFMRPSSPPTDGG 371
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAPXXGXKXGG 401
GG G PPPPPP GGGGG G GG
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGC---GGGGGGCGGGGGGCGG 81
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAPXXGXKXGG 401
GG G PPPPPP GGGGG G GG
Sbjct: 101 GGGGCGGGCAPPPPPPACGGG----CGGGGGGCGGGCGGGG 137
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 524 GGXXGGXXPPXPPPPPXXXXXFXFXXGGGGGGPPXG 417
GG GG P PPPP G GGGG G
Sbjct: 45 GGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCG 80
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 524 GGXXGGXXPPXPPPPPXXXXXFXFXXGGGGGG 429
GG GG P PPPPP GG GGG
Sbjct: 102 GGGCGGGCAP-PPPPPACGGGCGGGGGGCGGG 132
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAPXXGXKXGG 401
GG G PPPPP GGG G G GG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAPXXGXKXGG 401
GG G PPPPP GGG G G GG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical protein
ZK180.5a protein.
Length = 542
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 1028 PPPPPPPXFXXGXGGG 981
PPPPPPP G GGG
Sbjct: 65 PPPPPPPPAFGGLGGG 80
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical protein
ZK180.5b protein.
Length = 497
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 1028 PPPPPPPXFXXGXGGG 981
PPPPPPP G GGG
Sbjct: 65 PPPPPPPPAFGGLGGG 80
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical protein
ZK180.5c protein.
Length = 399
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 1028 PPPPPPPXFXXGXGGG 981
PPPPPPP G GGG
Sbjct: 65 PPPPPPPPAFGGLGGG 80
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.0 bits (52), Expect(2) = 2.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 1025 PPPPPPXFXXGXGG 984
PPPPPP G GG
Sbjct: 649 PPPPPPPPPSGAGG 662
Score = 23.8 bits (49), Expect(2) = 2.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1028 PPPPPPP 1008
PPPPPPP
Sbjct: 631 PPPPPPP 637
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.0 bits (52), Expect(2) = 2.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 1025 PPPPPPXFXXGXGG 984
PPPPPP G GG
Sbjct: 475 PPPPPPPPPSGAGG 488
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1028 PPPPPPP 1008
PPPPPPP
Sbjct: 435 PPPPPPP 441
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +3
Query: 372 GDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPP 524
G P E ++PP P PP PP G G G P P
Sbjct: 149 GAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGP 199
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 315 PXQKXXGGFLXXXXXXXXGGDXPPXEKNSPPXXXPXXGAPPPPP 446
P GG G PP P P GAPPPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.5 bits (58), Expect(2) = 3.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 512 GGXXPPXPPPPP 477
GG PP PPPPP
Sbjct: 574 GGPPPPPPPPPP 585
Score = 26.2 bits (55), Expect(2) = 6.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 401 PPXFXXPXGGPPPPP 445
PP GGPPPPP
Sbjct: 541 PPPVGMANGGPPPPP 555
Score = 21.0 bits (42), Expect(2) = 6.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 419 PXGGPPPPPXF 451
P PPPPP F
Sbjct: 577 PPPPPPPPPSF 587
Score = 20.6 bits (41), Expect(2) = 3.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 491 PPPPPXXXXXFXF 453
PPPPP F F
Sbjct: 577 PPPPPPPPPSFMF 589
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +3
Query: 372 GDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXP-PXXPP 524
G P E +PP P PP PP G G P P PP
Sbjct: 139 GASAPCEAKTPPPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 190
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 521 GXXGGXXPPXPPPPPXXXXXFXFXXGGGGGGPP 423
G GG P PP PP GG GPP
Sbjct: 145 GAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPP 177
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 521 GXXGGXXPPXPPPPPXXXXXFXFXXGGGGGGPP 423
G GG P PP PP GG GPP
Sbjct: 145 GAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPP 177
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPP 476
GG GG + PPPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +3
Query: 372 GDXPPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXP-PXXPP 524
G P E +PP P PP PP G G P P PP
Sbjct: 138 GAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 189
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPPXXXXXXXXXXXX 560
PP P G PPPPP + G G PP PP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRF--------GPPGMGGMPPPPPPGMRYPGGMPPPP 351
Query: 561 XXXXXXXGXGGXPPP 605
G G PPP
Sbjct: 352 PPRYPSAGPGMYPPP 366
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 1126 PPPPPXXXVGGGGXGXKXXXXXXXXXKKKKXXXPPPPPPXF 1004
PPPPP G G G + PPPPPP +
Sbjct: 317 PPPPPPSRFGPPGMG--GMPPPPPPGMRYPGGMPPPPPPRY 355
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAPXXGXKXGG 401
GG GG PPP P GGGGG G GG
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGC----GGGGGGCGGGGGGCGG 99
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAPXXGXKXGG 401
GG GG PPP P GGGGG G GG
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGC----GGGGGGCGGGGGGCGG 99
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXPPXXXXXXXXXXXX 560
PP P G PPPPP + G G PP PP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRF--------GPPGMGGMPPPPPPGMRYPGGMPPPP 361
Query: 561 XXXXXXXGXGGXPPP 605
G G PPP
Sbjct: 362 PPRYPSAGPGMYPPP 376
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 1126 PPPPPXXXVGGGGXGXKXXXXXXXXXKKKKXXXPPPPPPXF 1004
PPPPP G G G + PPPPPP +
Sbjct: 327 PPPPPPSRFGPPGMG--GMPPPPPPGMRYPGGMPPPPPPRY 365
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 764 PPPXXXXKKKXXPPPPPP 711
PPP K PPPPPP
Sbjct: 161 PPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 764 PPPXXXXKKKXXPPPPPP 711
PPP K PPPPPP
Sbjct: 161 PPPVSVPSSKPTPPPPPP 178
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 521 GXXGGXXPPXPPPPP 477
G GG PP PPPPP
Sbjct: 667 GGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 521 GXXGGXXPPXPPPPP 477
G GG PP PPPPP
Sbjct: 667 GGLGGFMPPPPPPPP 681
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAP 425
GG GG PPPPP GGG P
Sbjct: 23 GGGGGGCGCGAPPPPPACAPPPAPACGGGAPPP 55
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 524 GGXXGGXXPPXPPPPPXXXXXFXFXXGGGGGGPP 423
GG GG PPPPP GGG PP
Sbjct: 23 GGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -1
Query: 520 GXXGGXNXXPPPPPPXXXXXFXXKXGGGGGAPXXG 416
G GG PPPPPP G GGGAP G
Sbjct: 22 GGGGGGCCAPPPPPPCG-------GGCGGGAPAAG 49
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPP 476
GG G N PPPPPP
Sbjct: 560 GGYSNGNNFQPPPPPP 575
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPP 476
GG G N PPPPPP
Sbjct: 531 GGYSNGNNFQPPPPPP 546
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPP 476
GG G N PPPPPP
Sbjct: 560 GGYSNGNNFQPPPPPP 575
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
PP + +P GAPPPP G GGG PP P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP-----GMRPPPGAPGGGGGMYPPLIP 814
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
PP + +P GAPPPP G GGG PP P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP-----GMRPPPGAPGGGGGMYPPLIP 814
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 520 GXXGGXNXXPPPPPPXXXXXFXXKXGGGGG 431
G GG PPPPPP GGGGG
Sbjct: 22 GGGGGCGCAPPPPPPSPCG-----CGGGGG 46
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 1028 PPPPPPPXFXXGXGGGEK 975
PPPPPPP G G G K
Sbjct: 52 PPPPPPPPPMCGCGCGRK 69
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
PP + +P GAPPPP G GGG PP P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP-----GMRPPPGAPGGGGGMYPPLIP 814
>AL110487-17|CAB54422.2| 135|Caenorhabditis elegans Hypothetical
protein Y39E4B.13 protein.
Length = 135
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 1055 KXKKKKXXXPPPPPPPXFXXGXGGGEK 975
K K K P PP P G GGGEK
Sbjct: 99 KKMKSKLAAPGAPPKPAQSPGGGGGEK 125
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 381 PPXEKNSPPXXXPXXGAPPPPPXXKXKXXXXXGGGGGGXXXXPPXXP 521
PP + +P GAPPPP G GGG PP P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP-----GMRPPPGAPGGGGGMYPPLIP 814
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 520 GXXGGXNXXPPPPPPXXXXXFXXKXGGGGG 431
G GG PPPPPP GGGGG
Sbjct: 22 GGGGGCGCAPPPPPPACGC-----GGGGGG 46
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 429 APPPPPXXKXKXXXXXGGGGGGXXXXPP 512
APPPPP GGGGGG PP
Sbjct: 30 APPPPPPA-----CGCGGGGGGYAAPPP 52
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like (grd
related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 1028 PPPPPPPXFXXGXGGG 981
PPPPPPP G G G
Sbjct: 63 PPPPPPPPAPIGGGAG 78
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like (grd
related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 1028 PPPPPPPXFXXGXGGG 981
PPPPPPP G G G
Sbjct: 63 PPPPPPPPAPIGGGAG 78
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 523 GGXXGGXNXXPPPPPP 476
GG GG PPPPPP
Sbjct: 202 GGSGGGSGRFPPPPPP 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,784,714
Number of Sequences: 27780
Number of extensions: 395269
Number of successful extensions: 7185
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4808
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3036427278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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