Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M18
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.27
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.27
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.9
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 4.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 4.4
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 5.8
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 5.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/65 (33%), Positives = 23/65 (35%)
Frame = +3
Query: 513 PXKXKXPPXXXXXXXXVFSXPPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKX 692
P PP F PP F PP GG PP +F PPPP G
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG--I 104
Query: 693 XXPPP 707
PPP
Sbjct: 105 PPPPP 109
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 600 PPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
PP GG PP +F PPPP G P P
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +3
Query: 564 FSXPPXGXXFFXPPXKX--GGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
F PP G PP GG PP + PPPP G PPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGA--PPPPPPP 120
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
Frame = +3
Query: 498 SFXFPPXKXKXPPXXXXXXXXVFSXPPXGXXFFXPPXKXGGXPPXXKIFF-------FXX 656
S+ PP P PP G FF PP + G PP F F
Sbjct: 266 SYRGPPPHHPYGPPHPMHHPYAMMPPPFG--FFPPPPR-GHFPPPPPHFMGRGMPPPFMP 322
Query: 657 PPPPXGGGXXKXXXPPP 707
PPP G G + PPP
Sbjct: 323 PPPHFGMGPPRGFMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
Frame = +3
Query: 498 SFXFPPXKXKXPPXXXXXXXXVFSXPPXGXXFFXPPXKXGGXPPXXKIFF-------FXX 656
S+ PP P PP G FF PP + G PP F F
Sbjct: 266 SYRGPPPHHPYGPPHPMHHPYAMMPPPFG--FFPPPPR-GHFPPPPPHFMGRGMPPPFMP 322
Query: 657 PPPPXGGGXXKXXXPPP 707
PPP G G + PPP
Sbjct: 323 PPPHFGMGPPRGFMPPP 339
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
PP PP GG PP + PPPP G PPP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
PP PP GG PP + PPPP G PPP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
PP PP GG PP + PPPP G PPP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGSLPPP 321
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/82 (30%), Positives = 25/82 (30%), Gaps = 7/82 (8%)
Frame = +3
Query: 492 GGSFXFPPXKXKXPPXXXXXXXXVFSXPPXGXXFFXP-------PXKXGGXPPXXKIFFF 650
GGS PP PP PP P P GG PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GP 758
Query: 651 XXPPPPXGGGXXKXXXPPPFXF 716
PPPP GG PPP F
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
PP PP GG PP PPPP GG PPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPP-------PPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/82 (30%), Positives = 25/82 (30%), Gaps = 7/82 (8%)
Frame = +3
Query: 492 GGSFXFPPXKXKXPPXXXXXXXXVFSXPPXGXXFFXP-------PXKXGGXPPXXKIFFF 650
GGS PP PP PP P P GG PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GP 758
Query: 651 XXPPPPXGGGXXKXXXPPPFXF 716
PPPP GG PPP F
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
PP PP GG PP PPPP GG PPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPP-------PPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/82 (30%), Positives = 25/82 (30%), Gaps = 7/82 (8%)
Frame = +3
Query: 492 GGSFXFPPXKXKXPPXXXXXXXXVFSXPPXGXXFFXP-------PXKXGGXPPXXKIFFF 650
GGS PP PP PP P P GG PP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GP 341
Query: 651 XXPPPPXGGGXXKXXXPPPFXF 716
PPPP GG PPP F
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGF 363
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPP 707
PP PP GG PP PPPP GG PPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPP-------PPPPPGGFKGGPPPPPP 372
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPP 668
PP PP GG PP + PPPP
Sbjct: 773 PPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 573 PPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPP 668
PP PP GG PP + PPPP
Sbjct: 773 PPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 657 PPPPXGGGXXKXXXPPP 707
PPPP GGG PPP
Sbjct: 43 PPPPCGGGYEAPPPPPP 59
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +3
Query: 564 FSXPPXGXXFFXPPXKXGGXPPXXKIFFFXXPPPPXGGGXXKXXXPPPF 710
F PP FF P + G PP + PPP G PPP+
Sbjct: 21 FERPPPPDWFFPGPLRPWGPPPP---WHRNRGPPPFGPPPPWDRPPPPW 66
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 702 GGXXFXXPPPPXGGGG 655
G F PPPP GGGG
Sbjct: 207 GSGRFPPPPPPYGGGG 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,708,830
Number of Sequences: 27780
Number of extensions: 162496
Number of successful extensions: 422
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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