Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M13
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 279 3e-75
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 279 3e-75
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 132 2e-31
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 132 2e-31
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 116 2e-26
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 106 2e-23
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 106 2e-23
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 92 4e-19
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 92 4e-19
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 92 4e-19
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 85 5e-17
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 84 1e-16
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 84 1e-16
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 32 0.64
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.84
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC024800-2|AAF60723.2| 320|Caenorhabditis elegans Serpentine re... 30 2.6
AC024800-1|AAF60725.1| 320|Caenorhabditis elegans Serpentine re... 30 2.6
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 279 bits (683), Expect = 3e-75
Identities = 142/257 (55%), Positives = 177/257 (68%)
Frame = +1
Query: 121 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 300
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 301 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 480
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 481 EGFDIARNKSLEVLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 660
EGF+ A K+LE+LE K V R+ LV+V RT+L+TK+H LAD +T+ VDAVL IR
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
Query: 661 TPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPKYAKACXKCIHSHM*CVIRV* 840
G+ DLHMVE MEM H + +T LV+GLV+DHGARHP + +
Sbjct: 181 RDGEEPDLHMVEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYE 240
Query: 841 KDRSXSGFFYKSAXDKK 891
K SG FYK+A +++
Sbjct: 241 KTEVNSGLFYKTAKERE 257
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 279 bits (683), Expect = 3e-75
Identities = 142/257 (55%), Positives = 177/257 (68%)
Frame = +1
Query: 121 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 300
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 301 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 480
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 481 EGFDIARNKSLEVLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 660
EGF+ A K+LE+LE K V R+ LV+V RT+L+TK+H LAD +T+ VDAVL IR
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
Query: 661 TPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPKYAKACXKCIHSHM*CVIRV* 840
G+ DLHMVE MEM H + +T LV+GLV+DHGARHP + +
Sbjct: 181 RDGEEPDLHMVEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYE 240
Query: 841 KDRSXSGFFYKSAXDKK 891
K SG FYK+A +++
Sbjct: 241 KTEVNSGLFYKTAKERE 257
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 132 bits (320), Expect = 2e-31
Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 3/209 (1%)
Frame = +1
Query: 172 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 351
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 352 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 531
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 532 --KIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 702
K P+E RE LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKME 211
Query: 703 EMKHKTATETVLVKGLVMDHGARHPKYAK 789
+T+LVKG+V+D HP+ K
Sbjct: 212 GKVGGRLEDTILVKGIVIDKTMSHPQMPK 240
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 132 bits (320), Expect = 2e-31
Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 3/209 (1%)
Frame = +1
Query: 172 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 351
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 352 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 531
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 532 --KIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 702
K P+E RE LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKME 211
Query: 703 EMKHKTATETVLVKGLVMDHGARHPKYAK 789
+T+LVKG+V+D HP+ K
Sbjct: 212 GKVGGRLEDTILVKGIVIDKTMSHPQMPK 240
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 132 bits (320), Expect = 2e-31
Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 3/209 (1%)
Frame = +1
Query: 172 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 351
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 352 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 531
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 532 --KIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 702
K P+E RE LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKME 211
Query: 703 EMKHKTATETVLVKGLVMDHGARHPKYAK 789
+T+LVKG+V+D HP+ K
Sbjct: 212 GKVGGRLEDTILVKGIVIDKTMSHPQMPK 240
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 116 bits (279), Expect = 2e-26
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Frame = +1
Query: 187 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 366
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 367 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 546
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 547 VARENLVD-VARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGKPVDLHMVEIMEMKHK 717
++ + L++ +A TSL +KV + +L V+AV I V+L M++I++
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGD 215
Query: 718 TATETVLVKGLVMD 759
T E+ L++G ++D
Sbjct: 216 TVEESELIEGALID 229
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 116 bits (279), Expect = 2e-26
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Frame = +1
Query: 187 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 366
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 367 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 546
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 547 VARENLVD-VARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGKPVDLHMVEIMEMKHK 717
++ + L++ +A TSL +KV + +L V+AV I V+L M++I++
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGD 215
Query: 718 TATETVLVKGLVMD 759
T E+ L++G ++D
Sbjct: 216 TVEESELIEGALID 229
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 106 bits (254), Expect = 2e-23
Identities = 57/196 (29%), Positives = 110/196 (56%), Gaps = 5/196 (2%)
Frame = +1
Query: 187 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 366
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 367 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 543
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 544 E-VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GK-PVDLHMVEIMEMK 711
+ + R+++V+ A+TS+ +K+ AD + VDA +R GK ++ V +++
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAH 204
Query: 712 HKTATETVLVKGLVMD 759
K+A E+VLVKG ++
Sbjct: 205 GKSARESVLVKGYALN 220
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 106 bits (254), Expect = 2e-23
Identities = 57/196 (29%), Positives = 110/196 (56%), Gaps = 5/196 (2%)
Frame = +1
Query: 187 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 366
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 367 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 543
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 544 E-VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GK-PVDLHMVEIMEMK 711
+ + R+++V+ A+TS+ +K+ AD + VDA +R GK ++ V +++
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAH 204
Query: 712 HKTATETVLVKGLVMD 759
K+A E+VLVKG ++
Sbjct: 205 GKSARESVLVKGYALN 220
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 92.3 bits (219), Expect = 4e-19
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Frame = +1
Query: 121 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 288
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 289 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 468
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 469 RIITEGFDIARNKSLEVLESMKIPI-EVARENLVDVARTSLKTKVHPSLADVLTDACVDA 645
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 646 VLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMD 759
VL ++ G +L ++I++ + E+ L +G +++
Sbjct: 181 VLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE 215
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 92.3 bits (219), Expect = 4e-19
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Frame = +1
Query: 121 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 288
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 289 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 468
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 469 RIITEGFDIARNKSLEVLESMKIPI-EVARENLVDVARTSLKTKVHPSLADVLTDACVDA 645
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 646 VLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMD 759
VL ++ G +L ++I++ + E+ L +G +++
Sbjct: 181 VLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE 215
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 92.3 bits (219), Expect = 4e-19
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Frame = +1
Query: 121 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 288
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 289 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 468
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 469 RIITEGFDIARNKSLEVLESMKIPI-EVARENLVDVARTSLKTKVHPSLADVLTDACVDA 645
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 646 VLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMD 759
VL ++ G +L ++I++ + E+ L +G +++
Sbjct: 181 VLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE 215
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 85.4 bits (202), Expect = 5e-17
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Frame = +1
Query: 187 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 366
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++HP A +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 367 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLES-MKIPI 543
++L GE++ A ++ + HP +I + + A ++ E+ +
Sbjct: 88 TQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKTV 147
Query: 544 EVARE-NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPG---KPVDL-HMVEIMEM 708
++ + + V ++ L TK+ D+ + + AV TIR + +D+ I ++
Sbjct: 148 DITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIRVEKAGVREIDIKRYCRIEKI 207
Query: 709 KHKTATETVLVKGLVMDHGARHPK 780
++ +VKG+V++ H K
Sbjct: 208 PGGRIEDSQVVKGIVVNKDILHAK 231
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 84.2 bits (199), Expect = 1e-16
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Frame = +1
Query: 130 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 309
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 310 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 489
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 490 DIARNKSLEVLESMKIPIE---VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 660
A K+L+ L ++I I RE LV A T+L +K+ + VDAV T+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL- 184
Query: 661 TPGKPVDLHMVEIMEMKHKTATETVLVKGL 750
+ L+M+ I ++ E+ L+KG+
Sbjct: 185 --DAHLPLNMIGIKKVNGGNLHESRLIKGV 212
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 84.2 bits (199), Expect = 1e-16
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Frame = +1
Query: 130 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 309
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 310 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 489
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 490 DIARNKSLEVLESMKIPIE---VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 660
A K+L+ L ++I I RE LV A T+L +K+ + VDAV T+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL- 184
Query: 661 TPGKPVDLHMVEIMEMKHKTATETVLVKGL 750
+ L+M+ I ++ E+ L+KG+
Sbjct: 185 --DAHLPLNMIGIKKVNGGNLHESRLIKGV 212
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Frame = +1
Query: 157 FARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHP 336
F +A+ NI A + +++ GP G KM+++ + +T D +L E++IQHP
Sbjct: 21 FKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHP 80
Query: 337 TASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE 516
A +I V+L LL+ A I G+ P+ + G++ A K+LE
Sbjct: 81 AARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALE 140
Query: 517 VLESMKIPIEVARENLVDV---ARTSLKTKVHPS---LADVLTDACV 639
+L ++ + +N+ +V R+++ +K + + +AD++ ACV
Sbjct: 141 ILPTLVVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIADLVAKACV 187
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 31.9 bits (69), Expect = 0.64
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 9/191 (4%)
Frame = +1
Query: 160 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI---- 327
A QA+ V ++ + D + +GPKG ++ G KITKDG + + +
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 328 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNK 507
Q+ A LI +L + K+ I +G + I G +
Sbjct: 82 QNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRG--VMNAV 139
Query: 508 SLEVLESMKIPIEVAR-ENLVDVARTSLK--TKVHPSLADVLTDACVDAVLTIRTPGKPV 678
+ V E KI +V E + VA S T V ++D + V+T++ GK +
Sbjct: 140 EVVVAELKKISKKVTTPEEIAQVATISANGDTVVGNLISDAMKKVGTTGVITVK-DGKTL 198
Query: 679 --DLHMVEIME 705
+L ++E M+
Sbjct: 199 NDELELIEGMK 209
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.84
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 160 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 339
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 340 ASLIAR 357
+L A+
Sbjct: 82 QNLGAK 87
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 560 FSRATSIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 408
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 560 FSRATSIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 408
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
>AC024800-2|AAF60723.2| 320|Caenorhabditis elegans Serpentine
receptor, class h protein305 protein.
Length = 320
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = -1
Query: 762 MIHY*TFYKYSFSSRLVFHLHNFNHVQINRFAW 664
+++Y Y +SF+ + F++HN + V++ +FA+
Sbjct: 146 ILYYAANYLFSFTVMVSFYIHNSDQVELRKFAF 178
>AC024800-1|AAF60725.1| 320|Caenorhabditis elegans Serpentine
receptor, class h protein57 protein.
Length = 320
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = -1
Query: 762 MIHY*TFYKYSFSSRLVFHLHNFNHVQINRFAW 664
+++Y Y +SF+ + F++HN + V++ +FA+
Sbjct: 146 ILYYAANYLFSFTVMVSFYIHNSDQVELRKFAF 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,793,785
Number of Sequences: 27780
Number of extensions: 382378
Number of successful extensions: 886
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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