Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_M12
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0211 - 6436275-6436361,6436969-6437235,6438475-6438543,643...    29   6.9  
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148...    28   9.1  

>03_02_0211 -
           6436275-6436361,6436969-6437235,6438475-6438543,
           6439108-6439236,6439319-6439480,6439558-6439678,
           6439813-6439928,6440697-6440762,6441010-6441091,
           6441236-6441327,6441430-6441537,6441919-6442013,
           6442092-6442234,6442336-6442364,6442452-6442571,
           6442645-6442734,6443116-6443181,6443267-6443380,
           6443482-6443574
          Length = 682

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 296 VLNSYYADGLINKLTNASTDPEISFLGSLP-FLTNLLLEAINKSENAHVSAKVFLTRVLG 472
           VLN Y    L+  +T   + P+I  LG LP FL  L     + S      A   L+  L 
Sbjct: 185 VLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADAALSEFLQ 244

Query: 473 IVCKTELN-FTKFNCPQ 520
            +  + +N F K    Q
Sbjct: 245 EIKNSPINEFVKLGGEQ 261


>02_05_1326 - 35712102-35712473,35712608-35712720,35712944-35714857,
            35714942-35715135,35715237-35716786,35716946-35717049,
            35717258-35717399,35717692-35717910
          Length = 1535

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -2

Query: 595  VNA--TPETGIDIGRVDTLKFL*YYVPLRTIELREIEFRFANDPEYSRQKYFGADVSI 428
            VNA  TP+TG D+G+ D    L  +  + T++  + E    N+P  +    F ADV++
Sbjct: 940  VNAFVTPDTGNDMGKSDDYLDLPSFSSVHTVQNSKAE----NNPYKTTSSLFSADVNL 993


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,174,202
Number of Sequences: 37544
Number of extensions: 327846
Number of successful extensions: 798
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)