Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_M11
         (958 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0664 - 21659497-21659547,21659750-21659860,21659971-216600...   262   3e-70
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702...    28   9.6  

>12_02_0664 -
           21659497-21659547,21659750-21659860,21659971-21660039,
           21660442-21660513,21660669-21660749,21661256-21661348,
           21661581-21661733,21661846-21661897,21662033-21662218,
           21662830-21662949,21663059-21663297
          Length = 408

 Score =  262 bits (642), Expect = 3e-70
 Identities = 117/195 (60%), Positives = 155/195 (79%), Gaps = 1/195 (0%)
 Frame = +2

Query: 134 VDPWTVT-GKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSHRDL 310
           V+PW V+ GK   GIDYDKL+ +FG Q++DD L+ R  ++  R  H  LRRG+FF+HRDL
Sbjct: 25  VNPWEVSAGKG--GIDYDKLVDQFGCQRLDDALVARVARLTARPPHRFLRRGLFFAHRDL 82

Query: 311 NVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDDEKVLW 490
           N IL+L+E G+KFYLYTGRGPSS+++HLGH+IPFMFTK+LQD F VPL+IQLTDDEK LW
Sbjct: 83  NEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVIQLTDDEKFLW 142

Query: 491 RDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQV 670
           +++ VE+ +++A  NAKDIIA GFD   TFIF+D +++G   AFY+NM+++ +CVTYN+V
Sbjct: 143 KNLTVEETKRLARENAKDIIACGFDVERTFIFSDFNYVG--GAFYENMVKVARCVTYNKV 200

Query: 671 KGIFGFGDSDVIGKI 715
            GIFGF   D IGK+
Sbjct: 201 VGIFGFTPEDHIGKV 215


>02_05_0235 - 27068516-27069032,27069697-27069788,27070056-27070289,
            27071569-27071676,27071796-27071855,27072368-27072443,
            27072550-27072710,27076919-27076981,27077061-27077148,
            27077568-27078308,27078406-27079033,27079314-27079368,
            27082073-27083527
          Length = 1425

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 173  IDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLR 280
            + +  +++ +GS+ +DD+L    E V G   H LL+
Sbjct: 997  LQHPNIVRYYGSEMVDDKLYIYLEYVSGGSIHKLLQ 1032


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,574,417
Number of Sequences: 37544
Number of extensions: 351432
Number of successful extensions: 678
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)