Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M11
(958 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62570-1|CAA44450.1| 471|Homo sapiens IFP53 protein. 296 9e-80
X59892-1|CAA42545.1| 471|Homo sapiens 471 aa polypeptide (gamma... 296 9e-80
M77804-1|AAA67324.1| 471|Homo sapiens transfer RNA-Trp syntheta... 296 9e-80
BC095453-1|AAH95453.1| 471|Homo sapiens WARS protein protein. 296 9e-80
BC017489-1|AAH17489.1| 471|Homo sapiens tryptophanyl-tRNA synth... 296 9e-80
M61715-1|AAA61298.1| 471|Homo sapiens transfer RNA-Trp syntheta... 294 3e-79
X67923-1|CAB94199.1| 290|Homo sapiens tryptophanyl-tRNA synthet... 144 4e-34
X67920-1|CAB94198.1| 140|Homo sapiens tryptophanyl-tRNA synthet... 92 3e-18
>X62570-1|CAA44450.1| 471|Homo sapiens IFP53 protein.
Length = 471
Score = 296 bits (726), Expect = 9e-80
Identities = 132/196 (67%), Positives = 159/196 (81%)
Frame = +2
Query: 128 DFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSHRD 307
DFVDPWTV S GIDYDKLI RFGS KID ELI R E+ G++ HH LRRGIFFSHRD
Sbjct: 83 DFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRD 142
Query: 308 LNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDDEKVL 487
+N +L+ +E K FYLYTGRGPSS++MH+GH+IPF+FTKWLQDVFNVPL+IQ+TDDEK L
Sbjct: 143 MNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYL 202
Query: 488 WRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQ 667
W+D+ ++ A A NAKDIIA GFD + TFIF+DLD++G FY+N+++IQK VT+NQ
Sbjct: 203 WKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQ 262
Query: 668 VKGIFGFGDSDVIGKI 715
VKGIFGF DSD IGKI
Sbjct: 263 VKGIFGFTDSDCIGKI 278
>X59892-1|CAA42545.1| 471|Homo sapiens 471 aa polypeptide (gamma2)
protein.
Length = 471
Score = 296 bits (726), Expect = 9e-80
Identities = 132/196 (67%), Positives = 159/196 (81%)
Frame = +2
Query: 128 DFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSHRD 307
DFVDPWTV S GIDYDKLI RFGS KID ELI R E+ G++ HH LRRGIFFSHRD
Sbjct: 83 DFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRD 142
Query: 308 LNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDDEKVL 487
+N +L+ +E K FYLYTGRGPSS++MH+GH+IPF+FTKWLQDVFNVPL+IQ+TDDEK L
Sbjct: 143 MNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYL 202
Query: 488 WRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQ 667
W+D+ ++ A A NAKDIIA GFD + TFIF+DLD++G FY+N+++IQK VT+NQ
Sbjct: 203 WKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQ 262
Query: 668 VKGIFGFGDSDVIGKI 715
VKGIFGF DSD IGKI
Sbjct: 263 VKGIFGFTDSDCIGKI 278
>M77804-1|AAA67324.1| 471|Homo sapiens transfer RNA-Trp synthetase
protein.
Length = 471
Score = 296 bits (726), Expect = 9e-80
Identities = 132/196 (67%), Positives = 159/196 (81%)
Frame = +2
Query: 128 DFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSHRD 307
DFVDPWTV S GIDYDKLI RFGS KID ELI R E+ G++ HH LRRGIFFSHRD
Sbjct: 83 DFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRD 142
Query: 308 LNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDDEKVL 487
+N +L+ +E K FYLYTGRGPSS++MH+GH+IPF+FTKWLQDVFNVPL+IQ+TDDEK L
Sbjct: 143 MNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYL 202
Query: 488 WRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQ 667
W+D+ ++ A A NAKDIIA GFD + TFIF+DLD++G FY+N+++IQK VT+NQ
Sbjct: 203 WKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQ 262
Query: 668 VKGIFGFGDSDVIGKI 715
VKGIFGF DSD IGKI
Sbjct: 263 VKGIFGFTDSDCIGKI 278
>BC095453-1|AAH95453.1| 471|Homo sapiens WARS protein protein.
Length = 471
Score = 296 bits (726), Expect = 9e-80
Identities = 132/196 (67%), Positives = 159/196 (81%)
Frame = +2
Query: 128 DFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSHRD 307
DFVDPWTV S GIDYDKLI RFGS KID ELI R E+ G++ HH LRRGIFFSHRD
Sbjct: 83 DFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRD 142
Query: 308 LNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDDEKVL 487
+N +L+ +E K FYLYTGRGPSS++MH+GH+IPF+FTKWLQDVFNVPL+IQ+TDDEK L
Sbjct: 143 MNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYL 202
Query: 488 WRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQ 667
W+D+ ++ A A NAKDIIA GFD + TFIF+DLD++G FY+N+++IQK VT+NQ
Sbjct: 203 WKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQ 262
Query: 668 VKGIFGFGDSDVIGKI 715
VKGIFGF DSD IGKI
Sbjct: 263 VKGIFGFTDSDCIGKI 278
>BC017489-1|AAH17489.1| 471|Homo sapiens tryptophanyl-tRNA
synthetase protein.
Length = 471
Score = 296 bits (726), Expect = 9e-80
Identities = 132/196 (67%), Positives = 159/196 (81%)
Frame = +2
Query: 128 DFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSHRD 307
DFVDPWTV S GIDYDKLI RFGS KID ELI R E+ G++ HH LRRGIFFSHRD
Sbjct: 83 DFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRD 142
Query: 308 LNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDDEKVL 487
+N +L+ +E K FYLYTGRGPSS++MH+GH+IPF+FTKWLQDVFNVPL+IQ+TDDEK L
Sbjct: 143 MNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYL 202
Query: 488 WRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQ 667
W+D+ ++ A A NAKDIIA GFD + TFIF+DLD++G FY+N+++IQK VT+NQ
Sbjct: 203 WKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQ 262
Query: 668 VKGIFGFGDSDVIGKI 715
VKGIFGF DSD IGKI
Sbjct: 263 VKGIFGFTDSDCIGKI 278
>M61715-1|AAA61298.1| 471|Homo sapiens transfer RNA-Trp synthetase
protein.
Length = 471
Score = 294 bits (722), Expect = 3e-79
Identities = 132/196 (67%), Positives = 159/196 (81%)
Frame = +2
Query: 128 DFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSHRD 307
DFVDPWTV S GIDYDKLI RFGS KID ELI R E+ G++ HH LRRGIFFSHRD
Sbjct: 83 DFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRD 142
Query: 308 LNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDDEKVL 487
+N +L+ +E K FYLYTGRGPSS++MH+GH+IPF+FTKWLQDVFNVPL+IQ+TDDEK L
Sbjct: 143 MNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYL 202
Query: 488 WRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCVTYNQ 667
W+D+ ++ A A NAKDIIA GFD + TFIF+DLD++G FY+N+++IQK VT+NQ
Sbjct: 203 WKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQ 262
Query: 668 VKGIFGFGDSDVIGKI 715
VKGIFGF DSD IGKI
Sbjct: 263 VKGIFGFTDSDCIGKI 278
>X67923-1|CAB94199.1| 290|Homo sapiens tryptophanyl-tRNA synthetase
protein.
Length = 290
Score = 144 bits (349), Expect = 4e-34
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 425 WLQDVFNVPLIIQLTDDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFI 604
WLQDVFNVPL+IQ+TDDEK LW+D+ ++ A A NAKDIIA GFD + TFIF+DLD++
Sbjct: 1 WLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYM 60
Query: 605 GQCPAFYQNMLRIQKCVTYNQVKGIFGFGDSDVIGKI 715
G FY+N+++IQK VT+NQVKGIFGF DSD IGKI
Sbjct: 61 GMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKI 97
>X67920-1|CAB94198.1| 140|Homo sapiens tryptophanyl-tRNA synthetase
protein.
Length = 140
Score = 91.9 bits (218), Expect = 3e-18
Identities = 41/58 (70%), Positives = 44/58 (75%)
Frame = +2
Query: 128 DFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFFSH 301
DFVDPWTV S GIDYDKLI RFGS KID ELI R E+ G++ HH LRRGIFFSH
Sbjct: 83 DFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSH 140
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,335,742
Number of Sequences: 237096
Number of extensions: 1960939
Number of successful extensions: 6425
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6425
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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