Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_M07
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           34   0.14 
12_01_0799 + 7329394-7330125                                           32   0.56 
10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-44...    30   3.0  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   3.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.9  
08_02_0514 + 18021365-18022527,18023489-18023660                       28   9.1  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 716 RHASRREKGGQVSGKRQGRNRRAHEGSFQGETPG 615
           R   RR  GG+V+G+   R+RR   G+++GE  G
Sbjct: 241 RRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>12_01_0799 + 7329394-7330125
          Length = 243

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -1

Query: 400 SPQPNDRAQRVSERGSGRAPNTQTASSPRVGRFINAEKTSHTSTLNLKHKMNAIVVVNLF 221
           +P P   A R  E  S  +PN  +A+SP +     + ++S TST  +      +++V +F
Sbjct: 181 APGPASGANRSLETSSLTSPNMSSATSPSLQPAAESPQSSDTSTSQIASSYTTLILVLVF 240


>10_01_0038 +
           437738-438122,439215-439501,440111-440375,440687-440784
          Length = 344

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 28/88 (31%), Positives = 36/88 (40%)
 Frame = -3

Query: 653 RAHEGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLL 474
           R H+  F G   G    L G +   LS      R GGG     P+TR   G     G + 
Sbjct: 213 RGHDTVFDGVYVGRRWRLGGGSDGVLSSARSGGRGGGGDDSALPSTRS-GGKGDSGGSVA 271

Query: 473 TCSFLRYPLILWITVLPPLSELIPLAAA 390
           T S  R  +     + PPLS LI +A +
Sbjct: 272 TASPHRLQMAGNPRLSPPLSPLISIAGS 299


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 539 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGSSPRALSCSDPAAYRIP 685
           L PP          Q+WR+  PTG   + +FP G+ P A     PA  R P
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQP 63


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 351 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 506
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>08_02_0514 + 18021365-18022527,18023489-18023660
          Length = 444

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +3

Query: 558 ITKID--AQVRGGE-TRQDYKDTRRFPLEAPLVRSPVP 662
           ITKID  A V GG+ T Q     RR PL A +  SP+P
Sbjct: 396 ITKIDPAASVVGGKLTWQTAARPRRLPLSAKITFSPLP 433


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,181,988
Number of Sequences: 37544
Number of extensions: 484534
Number of successful extensions: 1427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)