Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M04
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0067 - 20460206-20460703,20461255-20461530 33 0.23
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 32 0.70
11_01_0359 - 2731522-2732346 31 0.93
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 31 1.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.6
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 30 2.1
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 30 2.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.8
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497... 30 2.8
07_03_1136 + 24218601-24218734,24218769-24219906 29 3.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 3.8
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.0
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 5.0
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 29 5.0
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 29 5.0
02_04_0382 - 22501041-22501279,22501717-22501810 29 5.0
08_02_1019 - 23657175-23658047 29 6.6
07_03_0600 + 19866757-19867218,19867920-19868429 29 6.6
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 29 6.6
03_01_0515 - 3864796-3865425 29 6.6
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.6
12_02_1219 + 27096477-27096590,27096704-27097078 28 8.7
06_03_1326 - 29355467-29355817 28 8.7
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP Q +F PPPPP
Sbjct: 6 PPPQWAMGPPPPPQ----YFQAGPPPPP 29
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G PPPPP
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPPPPPP 948
>11_01_0359 - 2731522-2732346
Length = 274
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP PPPPP
Sbjct: 44 PPPHSHSHPPPPPPHAYHHHHYPPPPPP 71
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP PPPPP
Sbjct: 355 PPPPPPPPPPPPVYYSSYVMLDRPPPPP 382
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 603 PPPXXXFXPPPPX-QXGXXFFXXXPPPPP 686
PPP + PPPP G PPPPP
Sbjct: 84 PPPQMYYQPPPPPPPYGVNSSQPPPPPPP 112
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 587 GVXXXAPPPXXXXXXPPXXXGXXFFXXXPPPP 682
G+ APPP PP G + PPPP
Sbjct: 424 GIPKPAPPPPPQKNPPPNLKGQCYGQPPPPPP 455
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP + PPPPP
Sbjct: 327 PPPAPPPPPPPPSRFNNTTPKPPPPPPP 354
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP PPPPP
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPPP 590
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 602 APPPXXXXXXPPXXXGXXFFXXXPPPPP 685
APPP PP F PPPPP
Sbjct: 543 APPPPPPPPPPPSGNKPAFSPPPPPPPP 570
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPP Q PPPPP
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPP 591
>02_03_0390 +
18448671-18448889,18449567-18449632,18449702-18449761,
18449864-18449959,18452287-18452447,18452669-18452790,
18452872-18453239,18453653-18453739,18453835-18453969,
18454349-18454471,18454771-18454854,18455023-18455187,
18455310-18455486,18455660-18455773,18455912-18456016,
18457056-18457174,18457244-18457385,18457461-18457555,
18457757-18457862,18458125-18458204,18458285-18458461,
18459828-18459912,18460024-18460104,18460208-18460351,
18460468-18460563,18460654-18460854,18461462-18461895,
18462417-18462478,18462622-18462872,18462956-18463030,
18463110-18463300,18463696-18463867,18463956-18464020,
18464646-18464778,18464861-18464962,18465047-18465130,
18465656-18465730,18465818-18465877,18465967-18466223,
18466560-18466608,18466781-18466941,18467013-18467079,
18467174-18467299,18467422-18467592,18468566-18468769,
18469059-18469165,18469608-18469737,18469774-18469959,
18470704-18470742
Length = 2202
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGG 605
GGGGG ++ P GGGG GG
Sbjct: 2 GGGGGGDGRRRRPSAGGGGGGGGRGGG 28
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG P GGGG GGG
Sbjct: 374 GGGGGGGGMLDKPDEAGGGGGGGSGGGG 401
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG K GGGG GGG
Sbjct: 376 GGGGGGMLDKPDEAGGGGGGGSGGGGGG 403
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG K GGGG GGG
Sbjct: 377 GGGGGMLDKPDEAGGGGGGGSGGGGGGG 404
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP + PPPPP
Sbjct: 353 PPPPPPPPPPPPPKLNTAPKPPPPPPPP 380
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP PPPPP
Sbjct: 351 PPPPPPPPPPPPPPPKLNTAPKPPPPPP 378
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP PPPPP
Sbjct: 350 PPPPPPPPPPPPPPPPKLNTAPKPPPPP 377
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G PPPPP
Sbjct: 616 PPPRPPGAPPPPPPPGKP--GGPPPPPP 641
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP Q F PPPPP
Sbjct: 45 PPQAAVAAPPPPPQV-IRVFAAAPPPPP 71
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG KK GGGG G G
Sbjct: 211 GGGGGGGGKKKGKKGGGGGGGGNGNGNG 238
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPPXXXQ 698
PPP PPP + PPPPP Q
Sbjct: 31 PPPMGPPPPPPMPPVPVMYLRGVPPPPPWLPQ 62
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 603 PPPXXXFXPPP-PXQXGXXFFXXXPPPPP 686
PP + PPP P G + PPPPP
Sbjct: 75 PPSPDYYDPPPSPYYGGGGGYGKPPPPPP 103
>08_02_1019 - 23657175-23658047
Length = 290
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG K GGGG GGG
Sbjct: 33 GGGGGGVPKPGGGVGGGGGGGGGGGGGG 60
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPP 680
PPP + PPPP Q PPP
Sbjct: 75 PPPPPQYAPPPPQQFQLPHQQYAPPP 100
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 682 GGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGG + P GGGG GGG
Sbjct: 9 GGGGGSHESGSPRGGGGGGGGGGGGGG 35
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP PPPPP
Sbjct: 93 PPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G PPPPP
Sbjct: 346 PPPPAKGPPPPPPPKGP---SPPPPPPP 370
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPP 683
PPP PPPP G PPPP
Sbjct: 356 PPPPKGPSPPPPPPPGGKKGGPPPPPP 382
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG ++ GGGG GGG
Sbjct: 91 GGGGGGYGQRGGGGGYGGGGGYGGGGGG 118
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG ++ GGGG GGG
Sbjct: 114 GGGGGGYGQRREGGYGGGGGYGGGRGGG 141
>06_03_1326 - 29355467-29355817
Length = 116
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 685 GGGGGXXXKKXXPXXXGGGGXXXXXGGG 602
GGGGG K GGGG GGG
Sbjct: 14 GGGGGGGGGKGGGGGSGGGGRSGGGGGG 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,094,204
Number of Sequences: 37544
Number of extensions: 320832
Number of successful extensions: 2337
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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