Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M03
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 39 0.006
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 34 0.13
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 34 0.13
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.39
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.39
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.89
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 0.89
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.89
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.89
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.89
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.89
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.89
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.89
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.89
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.89
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.6
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.6
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 3.6
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 3.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.3
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.3
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 384 FXPXXGGXGGFFXXXKXPPPPGXXGFFFXXPXPXPPXKXPXPGFGG 521
+ P GG GGF PPPPG G + P PP P PG G
Sbjct: 423 YGPPQGGPGGF-----GPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 385 FXXPGGGXGGFXXXKKXPPPXGXGXFFXGPXPXPPXKXPXXXXLGGGXG 531
+ P GG GGF PPP G G + P PP P G G
Sbjct: 423 YGPPQGGPGGFGP----PPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = +3
Query: 399 GGXGGFFXXXKXPPPPGXXGFFFXXPXPXPPXKXPXPGFGGGGXXXXPPXGXXXFXPKXG 578
GG GG+ PPPPG P P P G GG PP G + P
Sbjct: 404 GGPGGY-----GPPPPGG---------PGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPT 449
Query: 579 GXP 587
G P
Sbjct: 450 GFP 452
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = -2
Query: 586 GXPPXXGXXXXXPXGGXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGGGXFXXXKNPP 407
G P G P GG P PP P G G G P PG + PP
Sbjct: 184 GAPGGPGAPGNTPSGGAAGPPGPPGPPGGP--GNDGQPGGPGNPGAPGAVTEVPGQQGPP 241
Query: 406 XPP 398
PP
Sbjct: 242 GPP 244
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/58 (37%), Positives = 22/58 (37%)
Frame = -3
Query: 645 RGXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGXG 472
RG GG G G P G PP G PP G PPP G G G G G
Sbjct: 165 RGPPGGMG--GPPGHGGM--GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/74 (33%), Positives = 26/74 (35%)
Frame = -3
Query: 654 PPHRGXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGX 475
PP G GG P G P G PP G PP G + PP G G G
Sbjct: 155 PPLMG--GGGDPRGPPGGM----GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 208
Query: 474 GXXKKXPXXXGGGG 433
G P GG G
Sbjct: 209 G----GPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/58 (37%), Positives = 22/58 (37%)
Frame = -3
Query: 645 RGXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGXG 472
RG GG G G P G PP G PP G PPP G G G G G
Sbjct: 445 RGPPGGMG--GPPGHGGM--GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/74 (33%), Positives = 26/74 (35%)
Frame = -3
Query: 654 PPHRGXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGX 475
PP G GG P G P G PP G PP G + PP G G G
Sbjct: 435 PPLMG--GGGDPRGPPGGM----GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 488
Query: 474 GXXKKXPXXXGGGG 433
G P GG G
Sbjct: 489 G----GPGGPGGPG 498
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +2
Query: 434 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXGGXP 586
PPPP G + P P PP + P P G PP P GG P
Sbjct: 287 PPPPPSSG-MWPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMP 334
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 551 PXXGXXXPXPPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPPG 393
P G P PPP G G P P P G PP PPPG
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPP---PPPSRFGPPGMGGMPPPPPPG 340
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +2
Query: 434 PPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXGGXP 586
PPPP G + P P PP + P P G PP P GG P
Sbjct: 297 PPPPPSSG-MWPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMP 344
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 551 PXXGXXXPXPPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPPG 393
P G P PPP G G P P P G PP PPPG
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPP---PPPSRFGPPGMGGMPPPPPPG 350
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 541 GXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGGG 434
G PPPP P G GG G G GGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = -3
Query: 642 GXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGXGXXK 463
G GG G G PP GG G G GG G G
Sbjct: 35 GCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 94
Query: 462 KXPXXXGGGGFFXXXKTPXPPPXXG 388
GGGG P PPP G
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACG 119
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 541 GXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGG 437
G PPPP P G GG G G GGG
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 544 GGXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGGG 434
GG PPPP G G GG G G GGGG
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGG----CGGGGGG 139
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.89
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 437 PPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPP-XGGXXXXPXXGGXP 586
PPP G F P P P P P + GG PP GG P G P
Sbjct: 66 PPPVPNG--FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 385 FXXPGGGXGGFXXXKKXPPPXGXGXFFXGPXPXPPXKXPXXXXLGGGXGFXXP 543
F P GG GG PPP G G P LGGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = -2
Query: 544 GGXKXXPPPPXPGXGXFXGGXGXGXXKKXP-XXP--GGGGXFXXXKNPPXPPXXG 389
GG PPPP P GG G + P P GGGG PP P G
Sbjct: 25 GGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCP---PPAPACGG 76
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = +2
Query: 398 GGGXGVFXXXKXPPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXG 577
GG + PPPP P P PP P GG PP GG P G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISG 756
Query: 578 GXP 586
G P
Sbjct: 757 GPP 759
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 586 GXPPXXGXXXXXPXGGXKXXPPPPXPGXGXFXGG 485
G PP G P PPPP P G F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPPPGXXGFFFXXPXPXPPXKXPXPGFGGGGXXXXPPXG 551
PPPPG P P PP P GG PP G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Frame = -1
Query: 587 GXXPXFXGKXXXPXXGXXXPX---PPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXK 417
G P G P G P PPP G G P P P GG
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGG----CPP 770
Query: 416 KPPXPPPGXXK 384
PP PPPG K
Sbjct: 771 PPPPPPPGGFK 781
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 8/62 (12%)
Frame = +3
Query: 390 PXXGGXGGFFXXXKXPPPPGXXGFFFXXPXP--------XPPXKXPXPGFGGGGXXXXPP 545
P GG PPPPG P P PP P PG GG PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Query: 546 XG 551
G
Sbjct: 790 PG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = +2
Query: 398 GGGXGVFXXXKXPPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXG 577
GG + PPPP P P PP P GG PP GG P G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISG 756
Query: 578 GXP 586
G P
Sbjct: 757 GPP 759
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 586 GXPPXXGXXXXXPXGGXKXXPPPPXPGXGXFXGG 485
G PP G P PPPP P G F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPPPGXXGFFFXXPXPXPPXKXPXPGFGGGGXXXXPPXG 551
PPPPG P P PP P GG PP G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Frame = -1
Query: 587 GXXPXFXGKXXXPXXGXXXPX---PPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXK 417
G P G P G P PPP G G P P P GG
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGG----CPP 770
Query: 416 KPPXPPPGXXK 384
PP PPPG K
Sbjct: 771 PPPPPPPGGFK 781
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 8/62 (12%)
Frame = +3
Query: 390 PXXGGXGGFFXXXKXPPPPGXXGFFFXXPXP--------XPPXKXPXPGFGGGGXXXXPP 545
P GG PPPPG P P PP P PG GG PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Query: 546 XG 551
G
Sbjct: 790 PG 791
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 400 GGXGGFXXXKKXPPPXGXGXFFXGPXPXPP 489
G GG PPP G G F P P PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 390 PXXGGXGGFFXXXKXPPP-PGXXGFFFXXPXPXPP 491
P GG GGF PPP PG P PP
Sbjct: 664 PPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 500 GFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPPG 393
G+ G G P P G G F PP P PG
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPG 684
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 399 GGXGGFFXXXKXPPPPGXXGFFFXXPXPXPPXKXPXPG 512
G GG PPP G GF P PP P PG
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFM-----PPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 400 GGXGGFXXXKKXPPPXGXGXFFXGPXPXPP 489
G GG PPP G G F P P PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 390 PXXGGXGGFFXXXKXPPP-PGXXGFFFXXPXPXPP 491
P GG GGF PPP PG P PP
Sbjct: 664 PPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 500 GFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPPG 393
G+ G G P P G G F PP P PG
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPG 684
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 399 GGXGGFFXXXKXPPPPGXXGFFFXXPXPXPPXKXPXPG 512
G GG PPP G GF P PP P PG
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFM-----PPPPPPPPMPG 684
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = +2
Query: 398 GGGXGVFXXXKXPPPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXG 577
GG + PPPP P P PP P GG PP GG P G
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISG 339
Query: 578 GXP 586
G P
Sbjct: 340 GPP 342
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 586 GXPPXXGXXXXXPXGGXKXXPPPPXPGXGXFXGG 485
G PP G P PPPP P G F GG
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPPPGXXGFFFXXPXPXPPXKXPXPGFGGGGXXXXPPXG 551
PPPPG P P PP P GG PP G
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Frame = -1
Query: 587 GXXPXFXGKXXXPXXGXXXPX---PPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXK 417
G P G P G P PPP G G P P P GG
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGG----CPP 353
Query: 416 KPPXPPPGXXK 384
PP PPPG K
Sbjct: 354 PPPPPPPGGFK 364
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 8/62 (12%)
Frame = +3
Query: 390 PXXGGXGGFFXXXKXPPPPGXXGFFFXXPXP--------XPPXKXPXPGFGGGGXXXXPP 545
P GG PPPPG P P PP P PG GG PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Query: 546 XG 551
G
Sbjct: 373 PG 374
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 572 FXGKXXXPXXGXXXPXPPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPPG 393
F GK P G P PPPK G P P P G PP PP G
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG------SPPPPPTG 278
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 572 FXGKXXXPXXGXXXPXPPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPPG 393
F GK P G P PPPK G P P P G PP PP G
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG------SPPPPPTG 299
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 572 FXGKXXXPXXGXXXPXPPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPPG 393
F GK P G P PPPK G P P P G PP PP G
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG------SPPPPPTG 284
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 437 PPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXGGXP 586
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 480 PXPPXKXPXPGFGGGGXXXXPP 545
P PP P PG GGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 437 PPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXGGXP 586
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 480 PXPPXKXPXPGFGGGGXXXXPPXGXXXFXPKXGGXP 587
P PP P PG GGG PP P GG P
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP--LIPTRPGPGGPP 823
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 579 PPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGXGXXKKXPXXXGGGG 433
PP PP GG PPP GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = -2
Query: 544 GGXKXXPPPPXP---GXGXFXGGXGXGXXKKXPXXPGGGG 434
GG PPP P G G GG G G P P GGG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -3
Query: 507 GXGXFXGGXGXGXXKKX--PXXXGGGGFFXXXKTPXPPP 397
G G + GG G G GGGG+ P PPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = -2
Query: 544 GGXKXXPPPPXP---GXGXFXGGXGXGXXKKXPXXPGGGG 434
GG PPP P G G GG G G P P GGG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -3
Query: 507 GXGXFXGGXGXGXXKKX--PXXXGGGGFFXXXKTPXPPP 397
G G + GG G G GGGG+ P PPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 441 PPGXXGFFFXXPXPXPPXKXPX---PGFGGGGXXXXPPXGXXXFXPKXGGXP 587
PPG G FF P P PGF G G P F P+ G P
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMP 94
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 441 PPGXXGFFFXXPXPXPPXKXPX---PGFGGGGXXXXPPXGXXXFXPKXGGXP 587
PPG G FF P P PGF G G P F P+ G P
Sbjct: 52 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMP 103
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 441 PPGXXGFFFXXPXPXPPXKXPX---PGFGGGGXXXXPPXGXXXFXPKXGGXP 587
PPG G FF P P PGF G G P F P+ G P
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMP 94
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 437 PPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXGGXP 586
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 480 PXPPXKXPXPGFGGGGXXXXPPXGXXXFXPKXGGXP 587
P PP P PG GGG PP P GG P
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP--LIPTRPGPGGPP 823
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 579 PPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGXGXXKKXPXXXGGGG 433
PP PP GG PPP GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 437 PPPXXXGXFFXXPXPXPPXKXPXPXXWGGGXXFXPPXGGXXXXPXXGGXP 586
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 480 PXPPXKXPXPGFGGGGXXXXPP 545
P PP P PG GGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 544 GGXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGG 437
GG PPPP P G GG G P GG
Sbjct: 25 GGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAPAGG 60
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 544 GGXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGGG 434
GG PPPP G G G G P P GGG
Sbjct: 26 GGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGG 62
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 435 PPPPGXXGFFFXXPXPXPPXKXPXPGFGGG 524
PPPP + P PP K P P FG G
Sbjct: 550 PPPPPHPEEEYATPYTVPPGKQPFPPFGEG 579
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = +1
Query: 385 FXXPGGGXGGFXXXKKXPP-PXGXGXFFXGPXPXPPXKXP--XXXXLGGGXGFXXP 543
F P GG GG PP P G G P P + P LGGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = +1
Query: 385 FXXPGGGXGGFXXXKKXPP-PXGXGXFFXGPXPXPPXKXP--XXXXLGGGXGFXXP 543
F P GG GG PP P G G P P + P LGGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +3
Query: 390 PXXGGXGGFFXXXKXPPPPGXXGFFFXXPXPXPPXKXPXPGFGGGGXXXXPPXG 551
P GG G F PP G G F P PP P FG G PP G
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLF--DPSGAPPSGGPPGPFGPSG---APPSG 194
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = -3
Query: 654 PPHRGXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXGX 475
P G GG G G P + PP P GG P G G + G G
Sbjct: 289 PGGPGQPGGPGQDGGPGTDAAYCPCPPRT------PAGGGGGGDFPAGGGGGGYSTGGGG 342
Query: 474 GXXKKXPXXXGGGG 433
G G GG
Sbjct: 343 GRADSGGAAGGAGG 356
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/82 (28%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Frame = -3
Query: 657 NPPHRGXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXGXGXFXGGXG 478
+P G G GP G P + P PP + P Q G G GG G
Sbjct: 247 SPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQ-DGGPG 305
Query: 477 XG-----XXKKXPXXXGGGGFF 427
+ P GGGG F
Sbjct: 306 TDAAYCPCPPRTPAGGGGGGDF 327
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 390 PXXGGXGGFFXXXKXPPPPGXXGFFFXXPXPXPPXKXPXPGFGGGGXXXXP 542
P G G P PPG G P P PP + PG G P
Sbjct: 119 PGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGP 169
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 435 PPPPGXXGFFFXXPXPXPPXKXPXPGFG 518
PPPPG G+ P P PP P P G
Sbjct: 707 PPPPGIPGY---PPAPPPPGVGPPPPQG 731
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 6/56 (10%)
Frame = -1
Query: 551 PXXGXXXPXPPPKXXXXGFXXG------GXGXGPKKKXPXPXGGGXFXXXKKPPXP 402
P G PPP GF G G G GP P P GG PP P
Sbjct: 733 PPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGG---MHHMPPPP 785
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 435 PPPPGXXGFFFXXPXPXPPXKXPXPGFGG 521
PPPP G + P P PP P + G
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGGPSYAG 70
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 530 PXPPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPP 396
P PPP G P P P G PP PPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = -2
Query: 580 PPXXGXXXXXPXGGXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGGG 434
PP P PPPP P G G G P G GG
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 530 PXPPPKXXXXGFXXGGXGXGPKKKXPXPXGGGXFXXXKKPPXPPP 396
P PPP G P P P G PP PPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = -2
Query: 580 PPXXGXXXXXPXGGXKXXPPPPXPGXGXFXGGXGXGXXKKXPXXPGGGG 434
PP P PPPP P G G G P G GG
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 654 PPHRGXXGGXGPXGXPXEKXFFXGXPPXXGXXKXPPXGGXKXXPPPQXXG 505
PPH G G G P G PP G P G PPP G
Sbjct: 1561 PPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPP-PRLGMPPPGPPPPNGG 1609
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,132,808
Number of Sequences: 27780
Number of extensions: 247234
Number of successful extensions: 1554
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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