Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_M02
         (954 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   4.5  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   4.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   7.8  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 147 SYNNYPLTVLTRLVSS*THFNDHFVTXPYVGT 52
           SYN YP   LT+       F+  F T  +V T
Sbjct: 246 SYNGYPTATLTKNALPEQEFSKSFSTFGFVWT 277


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 147 SYNNYPLTVLTRLVSS*THFNDHFVTXPYVGT 52
           SYN YP   LT+       F+  F T  +V T
Sbjct: 246 SYNGYPTATLTKNALPEQEFSKSFSTFGFVWT 277


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 285 LHPFGQQPLVWQQL 244
           +HP G  P+VW Q+
Sbjct: 424 IHPVGTGPMVWYQI 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,380
Number of Sequences: 2352
Number of extensions: 6014
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)