Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_L24
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0392 - 20889699-20891726                                         28   7.8  
11_01_0133 + 1121392-1122731,1123417-1123858                           24   8.6  

>05_04_0392 - 20889699-20891726
          Length = 675

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 504 PPPXPXKKXGGXKXGGGG 451
           PPP    K GG K GGGG
Sbjct: 26  PPPPAGAKGGGAKSGGGG 43


>11_01_0133 + 1121392-1122731,1123417-1123858
          Length = 593

 Score = 23.8 bits (49), Expect(2) = 8.6
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 788 PPPPPPP 808
           PPPPPPP
Sbjct: 134 PPPPPPP 140



 Score = 22.6 bits (46), Expect(2) = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 791 PPPPPPXXXKK 823
           PPPPPP   K+
Sbjct: 164 PPPPPPQPDKR 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,594,925
Number of Sequences: 37544
Number of extensions: 375423
Number of successful extensions: 13390
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7436
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)