Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_L20
(905 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022206-1|AAY51600.2| 762|Drosophila melanogaster IP01025p pro... 47 4e-05
AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P... 38 0.019
BT022586-1|AAY55002.1| 255|Drosophila melanogaster IP06774p pro... 35 0.13
BT022553-1|AAY54969.1| 199|Drosophila melanogaster IP06574p pro... 35 0.13
AY089668-1|AAL90406.1| 428|Drosophila melanogaster RH40246p pro... 29 8.8
AY052008-1|AAK93432.1| 389|Drosophila melanogaster LD47143p pro... 29 8.8
AF145308-1|AAF08389.1| 389|Drosophila melanogaster 26S proteaso... 29 8.8
AE014297-4147|AAF56724.2| 428|Drosophila melanogaster CG5612-PA... 29 8.8
AE014297-3158|AAF56000.1| 389|Drosophila melanogaster CG5378-PA... 29 8.8
>BT022206-1|AAY51600.2| 762|Drosophila melanogaster IP01025p
protein.
Length = 762
Score = 46.8 bits (106), Expect = 4e-05
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 419 CAVLGCDD-CKNMDSIMFFGFP-EDSSLRQIWTDLTGRN-NWTPTDFSYICIQHFSVDCF 589
CAV+ C + SI F FP + L Q W + T R+ W P+ +S +C +HF + F
Sbjct: 5 CAVINCSHKYVHAGSISFHRFPFKRKDLLQKWKEFTQRSAQWMPSKWSALCSRHFGDEDF 64
Query: 590 KLDNEDRMVLVDKAVPSLKL 649
N +R L AVPS+++
Sbjct: 65 NCSN-NRKTLKKNAVPSIRV 83
>AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA
protein.
Length = 3781
Score = 37.9 bits (84), Expect = 0.019
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 416 TCAVLGCDDCKNMDSIMFFGFPEDSSLRQIWTDLTGRNNWTPTDFSY---ICIQHFSVDC 586
+CAV GC+ + D ++ G P+ + ++W + G+ T Y +C HF C
Sbjct: 2890 SCAVKGCEMIRPRDKVLLHGLPQRKDILRMWVE-NGQLEITEPQQQYMLRVCRNHFESRC 2948
Query: 587 FKLDNEDRMVLVDKAVPSLKLP 652
+DR L +VP+L LP
Sbjct: 2949 ---SFDDRR-LHPWSVPTLNLP 2966
Score = 35.9 bits (79), Expect = 0.076
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 419 CAVLGCDDCKNMDSIMFFGFPEDSSLRQIWTDLTGRNNWTPTDFSY-ICIQHFSVDCFKL 595
C+VL C + + + +P+D + W + + + +C HF+ +CF+
Sbjct: 2524 CSVLTCFQAE-ASGVRLYEYPKDMPTIRKWAAACRHRSMQASSHGFKVCQSHFAPECFE- 2581
Query: 596 DNEDRMVLVDKAVPSLKLPR 655
D + L++ +VP+L+L R
Sbjct: 2582 --PDTLNLIEGSVPTLELSR 2599
Score = 33.9 bits (74), Expect = 0.31
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 419 CAVLGCDDCKNMDSIMFFGFP-EDSSLRQIWTDLTGRNNWTPTDFS--YICIQHFSVDC 586
C V GC+ K + F FP ED + W + N P D + IC +HF DC
Sbjct: 1425 CVVEGCEASKEQPDVRLFRFPTEDDDMLWKWCNNLKMN---PVDCTGVRICNKHFEADC 1480
>BT022586-1|AAY55002.1| 255|Drosophila melanogaster IP06774p
protein.
Length = 255
Score = 35.1 bits (77), Expect = 0.13
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 419 CAVLGCDD---CKNMDSIMFFGFPEDSSLRQIWTDLTGRNNWTPTDFSYICIQHFSVDCF 589
CAV C + N +F FP++ Q W D R+N PT + IC +HF+ + F
Sbjct: 3 CAVKNCGNNNRIANRTKWRYFHFPKEKPNLQRWIDFCQRDNINPTT-ACICNEHFAPNDF 61
Query: 590 K 592
+
Sbjct: 62 E 62
>BT022553-1|AAY54969.1| 199|Drosophila melanogaster IP06574p
protein.
Length = 199
Score = 35.1 bits (77), Expect = 0.13
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 419 CAVLGCDD---CKNMDSIMFFGFPEDSSLRQIWTDLTGRNNWTPTDFSYICIQHFSVDCF 589
CAV C + N +F FP++ Q W D R+N PT + IC +HF+ + F
Sbjct: 3 CAVKNCGNNNRIANRTKWRYFHFPKEKPNLQRWIDFCQRDNINPTT-ACICNEHFAPNDF 61
Query: 590 K 592
+
Sbjct: 62 E 62
>AY089668-1|AAL90406.1| 428|Drosophila melanogaster RH40246p
protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 410 LYPCPYQHFVLIQELPSLLALVSFYYR*NLLNYPSFCILD*YSYQKI 270
LY C YQ E P+ ++V +Y NL+ Y F ILD Y+ + I
Sbjct: 226 LYDC-YQTSPDDSEKPTNHSVVFYYIDNNLITYVRFAILDHYANRNI 271
>AY052008-1|AAK93432.1| 389|Drosophila melanogaster LD47143p
protein.
Length = 389
Score = 29.1 bits (62), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 169 FIFSFVNCHSSNFFIHLGSKTK 104
F+FS NC NF++HL K
Sbjct: 259 FLFSLYNCQYENFYVHLAGVEK 280
>AF145308-1|AAF08389.1| 389|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p42A protein.
Length = 389
Score = 29.1 bits (62), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 169 FIFSFVNCHSSNFFIHLGSKTK 104
F+FS NC NF++HL K
Sbjct: 259 FLFSLYNCQYENFYVHLAGVEK 280
>AE014297-4147|AAF56724.2| 428|Drosophila melanogaster CG5612-PA
protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 410 LYPCPYQHFVLIQELPSLLALVSFYYR*NLLNYPSFCILD*YSYQKI 270
LY C YQ E P+ ++V +Y NL+ Y F ILD Y+ + I
Sbjct: 226 LYDC-YQTSPDDSEKPTNHSVVFYYIDNNLITYVRFAILDHYANRNI 271
>AE014297-3158|AAF56000.1| 389|Drosophila melanogaster CG5378-PA
protein.
Length = 389
Score = 29.1 bits (62), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 169 FIFSFVNCHSSNFFIHLGSKTK 104
F+FS NC NF++HL K
Sbjct: 259 FLFSLYNCQYENFYVHLAGVEK 280
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,743,325
Number of Sequences: 53049
Number of extensions: 657639
Number of successful extensions: 1370
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -