Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_L18
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 86 4e-17
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 81 8e-16
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 76 3e-14
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 71 1e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 50 2e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 49 4e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 49 4e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 49 4e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 49 4e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 49 4e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 49 4e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 49 5e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 49 5e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 9e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 9e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 48 9e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 48 9e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 48 9e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 46 5e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 46 5e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 44 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 44 1e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 42 8e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 42 8e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 41 0.001
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 41 0.001
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 41 0.001
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 40 0.003
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 39 0.006
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 39 0.006
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 38 0.010
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 37 0.023
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 35 0.071
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 32 0.50
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 32 0.50
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.88
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 31 1.2
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 31 1.2
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 30 2.0
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 30 2.0
Z93396-3|CAB07712.1| 597|Caenorhabditis elegans Hypothetical pr... 30 2.7
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 30 2.7
AC084152-5|AAK39311.1| 132|Caenorhabditis elegans Hypothetical ... 30 2.7
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 4.7
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 29 4.7
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 29 4.7
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 29 4.7
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 29 4.7
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 29 4.7
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 29 4.7
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical ... 29 6.2
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 107 bits (256), Expect = 1e-23
Identities = 54/94 (57%), Positives = 67/94 (71%), Gaps = 3/94 (3%)
Frame = +2
Query: 635 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYX 814
WPIA+SG D++ IA TGSGKTL+++LPA+VHI Q RG+GP LVL PTRELAQQ
Sbjct: 160 WPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQ 219
Query: 815 KFVIN-CNTQN-SHTCLFGGAPKGPQ-QXLXXGV 907
+ I+ C++ TCLFGGA KGPQ + L GV
Sbjct: 220 EVSIDFCHSLGLKMTCLFGGASKGPQARDLERGV 253
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +1
Query: 373 GASLRKPKWDLSRLKPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFD 552
G LR W L P +KDFY + V +R + +++ W S N++TL+GR +P+P F+
Sbjct: 74 GGRLRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFN 133
Query: 553 EAGFPDYVMDEIDKMGFAKPTPIQA 627
EA P + E+ F KPT IQ+
Sbjct: 134 EAPLPGQI-HELLYGKFQKPTVIQS 157
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 85.8 bits (203), Expect = 4e-17
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRE 796
P + P ALSG D++GIA TGSGKT +Y+ PAIVHI +QP G+GP+A+++ PTRE
Sbjct: 290 PIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRE 349
Query: 797 LA-QQYXKFVINCNTQN-SHTCLFGGAPKGPQ 886
LA Q + + C N + C +GG K Q
Sbjct: 350 LAIQVFQEAKKFCKVYNINPICAYGGGSKWEQ 381
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +1
Query: 421 FKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMG 600
F K+FY H D+++ DV ++ + + G P+P +F F +M+ I K
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 601 FAKPTPIQAQGL 636
+ +PTPIQA +
Sbjct: 285 YEQPTPIQAMAI 296
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 81.4 bits (192), Expect = 8e-16
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXK 817
P +SG D++GIA TGSGKTL+++LP HI +QP+ GDGPIA++LAPTRELA Q K
Sbjct: 336 PSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYK 395
Score = 58.0 bits (134), Expect = 9e-09
Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +1
Query: 415 KPFKKDFYVPHLDVEKRPESDVEAWRSE-NEITLKGRNIPKPTLTFDEAGFPDYVMDEID 591
+ FKK+FY+ ++ + +++V+A+R E + IT+KG + PKP T+ + G +M+ +
Sbjct: 261 RKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLK 320
Query: 592 KMGFAKPTPIQAQGL 636
K ++KPT IQAQ +
Sbjct: 321 KFEYSKPTSIQAQAI 335
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 76.2 bits (179), Expect = 3e-14
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 7/98 (7%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQ-PKXSRGD-----GPIALV 778
P + + WP+ LSG D +G++ TGSGKTL+++LPA++HI+ Q + + D P LV
Sbjct: 109 PIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLV 168
Query: 779 LAPTRELAQQYXKFVINCNTQN-SHTCLFGGAPKGPQQ 889
L+PTRELAQQ V + CL+GG + P+Q
Sbjct: 169 LSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSR-PEQ 205
Score = 37.9 bits (84), Expect = 0.010
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Frame = +1
Query: 400 DLSRLKPFKKDFY-VPHLDVEKRPESDVEAWRS---------ENEITLKGRNIPKPTLTF 549
+ S +KP +D Y +P+ PE E + + E T+K IP P +F
Sbjct: 29 NFSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVK---IPPPVNSF 85
Query: 550 DEA-GFPDYVMDEIDKMGFAKPTPIQAQ 630
++A G +M EI K GF KP+PIQ+Q
Sbjct: 86 EQAFGSNASIMGEIRKNGFEKPSPIQSQ 113
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 599 GLLSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQP---KXSRGDGPI 769
G+++ + +G P+ALSG DM+GIASTGSGKT++++LP ++ Q R +GP
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 770 ALVLAPTRELAQQYXKFVI 826
L++ P+RELA+Q +I
Sbjct: 269 GLIIVPSRELARQIFDLII 287
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 454 VEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKM-GFAKPTPIQAQ 630
+ ++ + D E R I+ +G +IP P +F E FP +++ + K G PT IQ Q
Sbjct: 160 IRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQ 219
Query: 631 GL 636
G+
Sbjct: 220 GI 221
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Frame = +2
Query: 599 GLLSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGD----GP 766
G L P + + PI L D++G+A TGSGKT +++LP +V I + PK R + GP
Sbjct: 320 GYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGP 379
Query: 767 IALVLAPTRELAQQ 808
A+++APTRELAQQ
Sbjct: 380 YAIIMAPTRELAQQ 393
Score = 54.8 bits (126), Expect = 8e-08
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +1
Query: 451 DVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQ 630
++ + + D +R + I++KG +P+P ++EAGFPD V + ++G+ +PTPIQ Q
Sbjct: 271 ELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQ 330
Query: 631 GL 636
+
Sbjct: 331 AI 332
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRG-----DGPIALVLAPTRELA 802
P L GHD++G A T +GKT ++ LP I I + +R DGP+AL+LAPTRELA
Sbjct: 413 PQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELA 472
Query: 803 QQ 808
Q
Sbjct: 473 AQ 474
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +2
Query: 644 ALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFV 823
+L+G D+VG A TGSGKTL+ ++P ++ + K S G AL+++PTRELA Q +
Sbjct: 110 SLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQTFSTI 168
Query: 824 INCNTQNSHTC--LFGGA 871
+ +C + GG+
Sbjct: 169 NAVGAHHGFSCGLVIGGS 186
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVH-INNQPKXSRGDG---PIALVLA 784
P + P+ G+D++ A TGSGKT +++LP + I++ + G+G P ++L
Sbjct: 366 PIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILT 425
Query: 785 PTRELAQQ 808
PTRELA Q
Sbjct: 426 PTRELADQ 433
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +2
Query: 599 GLLSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVH-INNQPKXSRGDG---P 766
G P + P+ GHD++ A TGSGKT +++LP + I+ + G+G P
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYP 630
Query: 767 IALVLAPTRELAQQ 808
++L PTREL Q
Sbjct: 631 RCIILTPTRELTDQ 644
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +2
Query: 599 GLLSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVH-INNQPKXSRGDG---P 766
G P + P+ GHD++ A TGSGKT +++LP + I+ + G+G P
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYP 630
Query: 767 IALVLAPTRELAQQ 808
++L PTREL Q
Sbjct: 631 RCIILTPTRELTDQ 644
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVH-INNQPKXSRGDG---PIALVLA 784
P + P+ G+D++ A TGSGKT +++LP + I++ + G+G P ++L
Sbjct: 366 PIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILT 425
Query: 785 PTRELAQQ 808
PTRELA Q
Sbjct: 426 PTRELADQ 433
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVH-INNQPKXSRGDG---PIALVLA 784
P + P+ G+D++ A TGSGKT +++LP + I++ + G+G P ++L
Sbjct: 366 PIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILT 425
Query: 785 PTRELAQQ 808
PTRELA Q
Sbjct: 426 PTRELADQ 433
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +2
Query: 599 GLLSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVH-INNQPKXSRGDG---P 766
G P + P+ GHD++ A TGSGKT +++LP + I+ + G+G P
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYP 630
Query: 767 IALVLAPTRELAQQ 808
++L PTREL Q
Sbjct: 631 RCIILTPTRELTDQ 644
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +2
Query: 641 IALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGD-GPIALVLAPTRELAQQYXK 817
+AL +++G A TGSGKT ++++P + + + K + G GP A+++APT+EL Q K
Sbjct: 122 LALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYK 181
Query: 818 FVI 826
+
Sbjct: 182 LFV 184
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQ 808
P+AL+G D+ A+TG+GKT +++LP + + +PK + LVL PTRELA Q
Sbjct: 180 PVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGA--SCTRVLVLVPTRELAIQ 234
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 48.0 bits (109), Expect = 9e-06
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Frame = +2
Query: 659 DMVGIASTGSGKTLSYILPAIVHI------NNQPKXSRGDGPIALVLAPTRELAQQYXKF 820
D++G A TGSGKTL++ +P + + + + + + GP AL++APTREL Q K
Sbjct: 28 DVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKH 87
Query: 821 V--INCNTQNSHTCLFGGAPKGPQQXL 895
+ + TQ T + GG + Q+ +
Sbjct: 88 INALISTTQLIATSIVGGLAQVKQERI 114
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 48.0 bits (109), Expect = 9e-06
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Frame = +2
Query: 659 DMVGIASTGSGKTLSYILPAIVHI------NNQPKXSRGDGPIALVLAPTRELAQQYXKF 820
D++G A TGSGKTL++ +P + + + + + + GP AL++APTREL Q K
Sbjct: 195 DVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKH 254
Query: 821 V--INCNTQNSHTCLFGGAPKGPQQXL 895
+ + TQ T + GG + Q+ +
Sbjct: 255 INALISTTQLIATSIVGGLAQVKQERI 281
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 565 PDYVMDEIDKMGFAKPTPIQA 627
P+ V++ I++MGF++PT IQ+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQS 183
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 48.0 bits (109), Expect = 9e-06
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRE 796
P + K P + G D+V ++ TGSGKT ++++P + + K G AL+++PTRE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKL----KRRDTTGIRALMVSPTRE 104
Query: 797 LAQQYXKFV--INCNTQNSHTCLFGG 868
LA Q K V + T CL GG
Sbjct: 105 LALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 48.0 bits (109), Expect = 9e-06
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRE 796
P + K P + G D+V ++ TGSGKT ++++P + + K G AL+++PTRE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKL----KRRDTTGIRALMVSPTRE 104
Query: 797 LAQQYXKFV--INCNTQNSHTCLFGG 868
LA Q K V + T CL GG
Sbjct: 105 LALQTFKVVKELGRFTGLRCACLVGG 130
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 48.0 bits (109), Expect = 9e-06
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHI-------NNQPKXSRGDG---P 766
P + P L+ D++ A TGSGKT +++LP I HI P + G P
Sbjct: 164 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYP 223
Query: 767 IALVLAPTRELA----QQYXKFVINCNTQNSHTCLFGG 868
ALVL+PTRELA ++ KF N Q + L+GG
Sbjct: 224 CALVLSPTRELAIQIHKEATKFSYKSNIQTA--ILYGG 259
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 463 RPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGL 636
R +S + + EN + + G ++P F+EAGF VM+ +++ G++KPTP+Q +
Sbjct: 112 RTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSI 170
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 48.0 bits (109), Expect = 9e-06
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHI-------NNQPKXSRGDG---P 766
P + P L+ D++ A TGSGKT +++LP I HI P + G P
Sbjct: 148 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYP 207
Query: 767 IALVLAPTRELA----QQYXKFVINCNTQNSHTCLFGG 868
ALVL+PTRELA ++ KF N Q + L+GG
Sbjct: 208 CALVLSPTRELAIQIHKEATKFSYKSNIQTA--ILYGG 243
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 463 RPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGL 636
R +S + + EN + + G ++P F+EAGF VM+ +++ G++KPTP+Q +
Sbjct: 96 RTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSI 154
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 48.0 bits (109), Expect = 9e-06
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHI-------NNQPKXSRGDG---P 766
P + P L+ D++ A TGSGKT +++LP I HI P + G P
Sbjct: 145 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYP 204
Query: 767 IALVLAPTRELA----QQYXKFVINCNTQNSHTCLFGG 868
ALVL+PTRELA ++ KF N Q + L+GG
Sbjct: 205 CALVLSPTRELAIQIHKEATKFSYKSNIQTA--ILYGG 240
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 463 RPESDVEAWRSEN-EITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQAQGL 636
R +S + + EN + + G ++P F+EAGF VM+ +++ G++KPTP+Q +
Sbjct: 93 RTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSI 151
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQ 808
P AL G D++G+A TGSGKT ++ +P + + + P+ LVL PTRELA Q
Sbjct: 76 PHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAF-----FCLVLTPTRELAFQ 127
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +2
Query: 599 GLLSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALV 778
G ++ + K L G D++ A TGSGKTL+++LPAI + ++ + +G ++
Sbjct: 87 GFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVII 145
Query: 779 LAPTRELAQQ 808
++PTREL+ Q
Sbjct: 146 VSPTRELSMQ 155
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQ 808
P L G D++G A TG+GKTL++ +P + ++ P G AL+L PTRELA Q
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQ 172
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQ 808
P L G D++G A TG+GKTL++ +P + ++ P G AL+L PTRELA Q
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQ 172
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Frame = +2
Query: 635 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRG-----DGPIALVLAPTREL 799
+PI + G+D+V A TGSGKTL++++P ++ + + + R P L++APTREL
Sbjct: 768 FPI-MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
Query: 800 AQQ 808
Q
Sbjct: 827 VNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Frame = +2
Query: 635 WPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRG-----DGPIALVLAPTREL 799
+PI + G+D+V A TGSGKTL++++P ++ + + + R P L++APTREL
Sbjct: 768 FPI-MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
Query: 800 AQQ 808
Q
Sbjct: 827 VNQ 829
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRG-DG---PIALVLA 784
P + P+ G D++ A TGSGKT +++LP + + + + G +G P ++L
Sbjct: 323 PIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILT 382
Query: 785 PTRELAQQ 808
PTRELA Q
Sbjct: 383 PTRELADQ 390
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRG-DG---PIALVLA 784
P + P+ G D++ A TGSGKT +++LP + + + + G +G P ++L
Sbjct: 323 PIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILT 382
Query: 785 PTRELAQQ 808
PTRELA Q
Sbjct: 383 PTRELADQ 390
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 44.0 bits (99), Expect = 2e-04
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPA---IVHINNQPKXSRGDGP--IALVL 781
P + + P +++ A TGSGKTL++ LP I+ + + S + +A+VL
Sbjct: 151 PIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVL 210
Query: 782 APTREL-AQQYXKFVINCNTQNSHTCLFGG 868
PTREL AQ Y +F+ C + F G
Sbjct: 211 EPTRELAAQTYTEFLKYCANTSISAANFSG 240
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXK 817
P L D++ A +G+GKT ++ + + ++ Q + ++ AL+L+PTRELA Q K
Sbjct: 58 PAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQ-----ALILSPTRELAVQIQK 112
Query: 818 FVI---NCNTQNSHTCLFG 865
V+ + H C+ G
Sbjct: 113 VVLALGDYMNVQCHACIGG 131
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXK 817
P L D++ A +G+GKT ++ + + ++ Q + ++ AL+L+PTRELA Q K
Sbjct: 58 PAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQ-----ALILSPTRELAVQIQK 112
Query: 818 FVI---NCNTQNSHTCLFG 865
V+ + H C+ G
Sbjct: 113 VVLALGDYMNVQCHACIGG 131
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +2
Query: 650 SGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVIN 829
+G D++ A +G+GKT ++ + + I+++ + ALV+APTRELAQQ K +
Sbjct: 65 TGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSA 119
Query: 830 CN---TQNSHTCLFGGAPKGPQQXLXXGV 907
N C+ G + + Q+ L G+
Sbjct: 120 LGEYLNVNILPCIGGTSVRDDQRKLEAGI 148
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +2
Query: 650 SGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVIN 829
+G D++ A +G+GKT ++ + + I+++ + ALV+APTRELAQQ K +
Sbjct: 65 TGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSA 119
Query: 830 CN---TQNSHTCLFGGAPKGPQQXLXXGV 907
N C+ G + + Q+ L G+
Sbjct: 120 LGEYLNVNILPCIGGTSVRDDQRKLEAGI 148
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRE 796
P + +AL+G D++ A G+GKT +Y +P I I K + A+V+ PTRE
Sbjct: 68 PIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQ-----AMVIVPTRE 122
Query: 797 LAQQ 808
LA Q
Sbjct: 123 LALQ 126
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 659 DMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQ 808
D+V + TGSGKTL+++LP + I N G AL+L+P+REL Q
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQ 95
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/84 (27%), Positives = 44/84 (52%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRE 796
P + + P+ L G DM+ A +G+GKTL + + A+ +++ SR +++ PTRE
Sbjct: 47 PVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLD-----SRSSHIQKVIVTPTRE 101
Query: 797 LAQQYXKFVINCNTQNSHTCLFGG 868
++ Q + V + T ++ G
Sbjct: 102 ISVQIKETVRKVAPTGARTSVYVG 125
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/84 (27%), Positives = 44/84 (52%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRE 796
P + + P+ L G DM+ A +G+GKTL + + A+ +++ SR +++ PTRE
Sbjct: 47 PVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLD-----SRSSHIQKVIVTPTRE 101
Query: 797 LAQQYXKFVINCNTQNSHTCLFGG 868
++ Q + V + T ++ G
Sbjct: 102 ISVQIKETVRKVAPTGARTSVYVG 125
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 37.9 bits (84), Expect = 0.010
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Frame = +2
Query: 617 PFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAI----------VHINNQPKXSR-GDG 763
P + P G D++ A TGSGKT ++++P + VH + R
Sbjct: 191 PVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQY 250
Query: 764 PIALVLAPTRELAQQ 808
P ALVL+PTREL+ Q
Sbjct: 251 PSALVLSPTRELSLQ 265
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 496 ENEITLKGRNIPKPTLTFDEAGFPDYVMDEIDKMGFAKPTPIQ 624
E + G ++P+P F + +++ + I G+ +PTP+Q
Sbjct: 151 EIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQ 193
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 36.7 bits (81), Expect = 0.023
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 644 ALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTREL-AQQYXKF 820
AL G + V +A TGSGKT I A+ HI + + S+G ++L P L QQ +F
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHI--EERTSQGKPSRVVLLVPKIPLVGQQKDRF 439
Query: 821 VINCN 835
+ CN
Sbjct: 440 LKYCN 444
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 638 PIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQ 808
P L D+ A TGSGKT+ Y+LP + + ++P A++L P + L Q
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQ----AVILVPVQTLVAQ 203
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 647 LSGHDMVGIASTGSGKTLSYILPAIV 724
L GHD + TG+GK+L Y LPA++
Sbjct: 260 LMGHDTFVLMPTGAGKSLCYQLPAVI 285
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 647 LSGHDMVGIASTGSGKTLSYILPAIV 724
L GHD + TG+GK+L Y LPA++
Sbjct: 260 LMGHDTFVLMPTGAGKSLCYQLPAVI 285
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 674 ASTGSGKTLSYILPAI-VHINNQP---KXSRGDGPIALVLAPTRELAQQ 808
A TG GKT ++++PAI + + +P S P L+LA T L +Q
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQ 184
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +2
Query: 605 LSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLA 784
L L ++ + +AL G + + A TGSGKT+ I I+ + + + S G AL +
Sbjct: 291 LCLRNYQEELCQVALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMT 348
Query: 785 PTRELAQQYXKFVINCNTQNSHTCLFGGAPKGP 883
P + Q + + HT + G+ P
Sbjct: 349 PNSMILNQQAASISSYLDHVYHTQIIQGSDNVP 381
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +2
Query: 605 LSLHPFKPKGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLA 784
L L ++ + +AL G + + A TGSGKT+ I I+ + + + S G AL +
Sbjct: 291 LCLRNYQEELCQVALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMT 348
Query: 785 PTRELAQQYXKFVINCNTQNSHTCLFGGAPKGP 883
P + Q + + HT + G+ P
Sbjct: 349 PNSMILNQQAASISSYLDHVYHTQIIQGSDNVP 381
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 647 LSGHDMVGIASTGSGKTLSYILPAIV 724
+S D V I STG GK+L Y LPA++
Sbjct: 99 MSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 647 LSGHDMVGIASTGSGKTLSYILPAIV 724
+S D V I STG GK+L Y LPA++
Sbjct: 122 MSKEDAVVILSTGGGKSLCYQLPALL 147
>Z93396-3|CAB07712.1| 597|Caenorhabditis elegans Hypothetical
protein ZC15.5 protein.
Length = 597
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 829 LQYSKFXHLFVWRCX*RTPAXIXXRC 906
LQ+S+ H W C R P I RC
Sbjct: 544 LQFSRIEHTHAWTCQTRAPTTIILRC 569
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 620 FKPKGWPIA---LSGHDMVGIASTGSGKTLSYILPAIV 724
F+ K W + L G D + STG GK++ Y LP+++
Sbjct: 228 FREKQWDVVRNVLGGKDQFVLMSTGYGKSVCYQLPSLL 265
>AC084152-5|AAK39311.1| 132|Caenorhabditis elegans Hypothetical
protein Y102A11A.5 protein.
Length = 132
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 415 KPFKKDFYVPHLDVEKRPESDVEAWRSENEITLKGRNIPKPTLTFDEAGFPD 570
K + D VP L + P ++AW+ E + +KG+N + F G+ D
Sbjct: 36 KKIRIDLLVPSLSIMSDPVI-LDAWKHEKSVHIKGKNCEQKPWVFMIYGWQD 86
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 310 NEGFCYGCDSYFGFEIDC 257
NE FCYG DS+ G I C
Sbjct: 358 NEEFCYGFDSFIGTVISC 375
>U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical
protein C28G1.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -2
Query: 627 GLNGCRLSKPHFIYFIHNIIWKTSLIKSKCWFWYISTFQSNFI 499
G+N R + P+ + N W+ L + + W +Y S + S I
Sbjct: 82 GINDVRRNSPNQTRILFNAGWEEKLHEKRSWLFYPSKYNSKVI 124
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 659 DMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFV 823
+++ A +G+GKT +++L + I+ P + LAPT ELA+Q + V
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVV 299
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 659 DMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFV 823
+++ A +G+GKT +++L + I+ P + LAPT ELA+Q + V
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVV 324
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 659 DMVGIASTGSGKTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFV 823
+++ A +G+GKT +++L + I+ P + LAPT ELA+Q + V
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVV 708
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 692 KTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVINCNTQ 841
++ S++ + N Q K + +G VL P R L Q + + + CN Q
Sbjct: 7 ESFSFVYSCDLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVYCNNQ 56
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 692 KTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVINCNTQ 841
++ S++ + N Q K + +G VL P R L Q + + + CN Q
Sbjct: 7 ESFSFVYSCDLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVYCNNQ 56
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 692 KTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVINCNTQ 841
++ S++ + N Q K + +G VL P R L Q + + + CN Q
Sbjct: 7 ESFSFVYSCDLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVYCNNQ 56
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 692 KTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVINCNTQ 841
++ S++ + N Q K + +G VL P R L Q + + + CN Q
Sbjct: 11 ESFSFVYSCDLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVYCNNQ 60
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 692 KTLSYILPAIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVINCNTQ 841
++ S++ + N Q K + +G VL P R L Q + + + CN Q
Sbjct: 11 ESFSFVYSCDLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVYCNNQ 60
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 653 GHDMVGIASTGSGKTLSYILPAI-VHINNQPK---XSRGDGPIALVLAPTRELAQQ 808
G +V A TG GKT ++++PAI + N+ S P L++A T L Q
Sbjct: 30 GRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMASTSALVDQ 85
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 701 SYILPAIVHINNQPKXSRGDG---PIALVLAPTRELAQQYXKFVI 826
S + P + ++ +P+ DG P A+++APT+EL Q K +
Sbjct: 73 SLVGPQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKLFV 117
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 680 TGSGKTLSYILPAIVH 727
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical
protein F32D1.3 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 716 AIVHINNQPKXSRGDGPIALVLAPTRELAQQYXKFVI 826
AI+H+N + + + IAL+L PT ++A++ K VI
Sbjct: 729 AILHLNQKYDLALKEYEIALILDPTSDVARENRKKVI 765
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,141,805
Number of Sequences: 27780
Number of extensions: 347525
Number of successful extensions: 898
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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