Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_L15
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 139 3e-33
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 35 0.076
09_02_0303 + 7112456-7113244,7113328-7113488,7114523-7114583,711... 34 0.17
06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,300... 33 0.30
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700... 33 0.40
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 32 0.53
08_01_0397 - 3509186-3510291,3510322-3512335 32 0.53
03_02_0825 + 11565701-11565862,11565963-11566154,11567674-115677... 32 0.53
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 32 0.70
09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937... 32 0.70
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076... 31 0.93
02_04_0113 - 19861904-19862197,19862338-19862496,19862580-198638... 31 0.93
02_02_0074 + 6567362-6567550,6567685-6567753,6567869-6567970,656... 31 0.93
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 31 1.2
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380... 31 1.2
11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,259... 31 1.6
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177... 31 1.6
01_01_0598 + 4443768-4443949,4444053-4444150,4444275-4444308,444... 31 1.6
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 30 2.1
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 30 2.1
02_02_0616 - 12160899-12161506,12161698-12161821,12161974-121620... 30 2.1
02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 30 2.1
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 30 2.1
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 30 2.1
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 29 3.8
08_01_1084 - 11120719-11120950,11121035-11121133,11122446-111228... 29 3.8
05_06_0196 + 26293889-26294122,26294317-26294375,26294454-262945... 29 3.8
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 29 3.8
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 3.8
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 29 5.0
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 29 5.0
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 29 5.0
05_03_0017 - 7392742-7393110,7393212-7393319,7393522-7394079,739... 29 5.0
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 29 5.0
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 29 5.0
01_07_0299 + 42594363-42594424,42594516-42594798,42595185-425954... 29 5.0
05_06_0022 + 24988363-24988453,24989102-24989325,24989433-249894... 29 6.6
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 29 6.6
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 29 6.6
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 29 6.6
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 28 8.7
11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830 28 8.7
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 28 8.7
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 28 8.7
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 8.7
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 28 8.7
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 28 8.7
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 28 8.7
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 139 bits (336), Expect = 3e-33
Identities = 59/120 (49%), Positives = 88/120 (73%)
Frame = +1
Query: 247 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNL 426
++ +G +P+V+ GPSG GK TL+ +L+KE+P KFGFSVSHTTRAPR E +GVHYHFT
Sbjct: 169 VIGEGQKPIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTER 228
Query: 427 NDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPL 606
+ + I +G+F+E A GN+YGTS +AV+ V GK C+LDI+++G + ++ + L+ +
Sbjct: 229 SKIEEEISEGKFLEFAHVHGNVYGTSVEAVESVTDEGKRCILDIDVQGARSVRASSLEAI 288
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +2
Query: 611 VFVMPPSIDELERRLRARNTEQEDSLKKRLETARREIKFGQEPGNF 748
+FV PPS +ELE+RLRAR TE E+ ++KRL AR E+ PG F
Sbjct: 290 IFVCPPSFEELEKRLRARGTETEEQIQKRLRNARAELDQSNSPGLF 335
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 35.1 bits (77), Expect = 0.076
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFS 357
+++G + + +CGP GSGKS+LL LL E P G S
Sbjct: 433 IRRGEK-VAVCGPVGSGKSSLLCALLGEIPRTSGMS 467
>09_02_0303 +
7112456-7113244,7113328-7113488,7114523-7114583,
7114665-7114733,7114862-7114947,7115399-7115456,
7115631-7115843,7116059-7116124,7116368-7116484,
7116595-7116657
Length = 560
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 262 PRPLVLCGPSGSGKST-LLKRLLKEFPD 342
P+PL+L GP G GKST LL+RLL ++ +
Sbjct: 37 PQPLILHGPRGVGKSTLLLRRLLPQWSE 64
>06_01_0421 -
3000486-3000595,3000909-3001148,3001659-3001722,
3001969-3002274,3002365-3002579,3003047-3003341,
3003487-3003651,3003745-3004341,3004855-3004941,
3005022-3005342,3006218-3008242
Length = 1474
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 247 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
+V K + +CG GSGKSTLL +L E P G
Sbjct: 640 LVVKSGEKVAICGEVGSGKSTLLASVLGEVPKTEG 674
>01_06_1699 -
39269477-39269574,39269690-39269929,39270029-39270092,
39270251-39270771,39271032-39271326,39271400-39271564,
39271650-39272237,39272617-39272703,39272982-39274429,
39274515-39275015,39275574-39275678,39276095-39276143
Length = 1386
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 339
+ KG + + +CGP GSGKS+LL ++ E P
Sbjct: 560 ISKGQK-VAVCGPVGSGKSSLLYSIMGEIP 588
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 247 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG-FSVSHTTRAPRAGEKNGVHYH 414
+V++G + + + GP+G GKSTLLK +L + G + P E+N +H H
Sbjct: 455 IVERGEK-IAIIGPNGCGKSTLLKLILGMEKTQGGEVLLGEHNVLPNYFEQNQIHVH 510
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 632 IDELERRLRARNTEQEDSLKKRLETARREIKFGQE 736
++E ERR + + E++ L + +ET RR IK QE
Sbjct: 151 VEEAERRRQKKKEEEQKQLDEEMETRRRRIKEWQE 185
>03_02_0825 +
11565701-11565862,11565963-11566154,11567674-11567718,
11568224-11568535,11569036-11569092
Length = 255
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 611 VFVMPPSIDELERRLRARNTEQEDSLKKRLETARREIK 724
+F++ S + L +RL R TE D L R+ TAR E+K
Sbjct: 167 IFLVAESEEALVKRLIHRKTETSDMLLVRVATAREEVK 204
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 262 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTR 375
PR ++LCGP G+GK TL+ R L K G VS R
Sbjct: 419 PRGVLLCGPPGTGK-TLIARALACAASKAGQKVSFYMR 455
>09_02_0434 +
9365038-9366150,9367352-9368680,9368906-9370012,
9370960-9371022
Length = 1203
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 250 VQKGPRPLV-LCGPSGSGKSTLLKRLLKEF 336
+ +GP ++ +CGP G GK+ LLKR+ F
Sbjct: 149 ITEGPSAIIGICGPGGVGKTHLLKRINNNF 178
>12_02_0781 +
23105554-23106855,23107191-23107511,23107581-23107667,
23107907-23108302,23108327-23108500,23108600-23108764,
23108857-23109151,23109319-23109446,23109681-23109986,
23110531-23110591,23110676-23110915,23111251-23111372
Length = 1198
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 247 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 339
MV+ G + + +CG GSGKS+LL +L E P
Sbjct: 400 MVKSGTK-VAICGEVGSGKSSLLAAILGEVP 429
>02_04_0113 -
19861904-19862197,19862338-19862496,19862580-19863833,
19864086-19864124
Length = 581
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +1
Query: 388 GEKNGVHYHFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAV----DDVRRTGKICVLD 555
G H H NL+++ +++K E ++ + GN K+A+ VR K C++
Sbjct: 249 GNFQDFHLHAPNLSNLDVSLDKTEAQQSVVVEGNRKNYLKQAMVSLTSIVRLVMKRCIIA 308
Query: 556 I--EMEGVKQI 582
+ E EG KQ+
Sbjct: 309 LPQEFEGFKQL 319
>02_02_0074 +
6567362-6567550,6567685-6567753,6567869-6567970,
6568386-6568627,6569057-6569195,6569298-6569333,
6569838-6569972,6570315-6570547,6571204-6571298,
6571331-6571374,6571808-6571888
Length = 454
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 256 KGPRPLVLCGPSGSGKSTLLKRLL 327
+GPR +++ GPS SGKSTL K LL
Sbjct: 120 QGPR-VIIVGPSDSGKSTLCKMLL 142
>05_02_0030 +
5826065-5826092,5826307-5828309,5828412-5828732,
5828821-5828907,5828981-5829583,5829680-5829844,
5829941-5830235,5830320-5830534,5830621-5830926,
5831200-5831263,5831384-5831623,5831756-5831853
Length = 1474
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRLLKEFPDKFG 351
+ +CGP G+GKS+LL +L E P G
Sbjct: 650 IAVCGPVGAGKSSLLCAMLGEIPRMSG 676
>01_01_0517 +
3803740-3806106,3806226-3806312,3806397-3807035,
3807118-3807282,3807363-3807657,3807739-3807953,
3808125-3808430,3808539-3808602,3808735-3808974,
3809150-3809253
Length = 1493
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 253 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
Q+G R + +CG GSGKS+LL +L E P G
Sbjct: 650 QQGMR-IAVCGTVGSGKSSLLSCILGEIPKLSG 681
>11_01_0346 -
2589111-2589220,2589613-2589852,2589956-2590028,
2590301-2590606,2590698-2590912,2591461-2591755,
2591901-2592065,2592142-2592738,2593029-2593115,
2593203-2593523,2594047-2596071
Length = 1477
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRLLKEFPDKFG 351
+ +CG GSGKSTLL +L E P G
Sbjct: 648 VAICGEVGSGKSTLLAAVLGEVPKTEG 674
>04_04_0961 +
29715938-29716034,29716918-29717133,29717438-29717776,
29718247-29719274,29719465-29719551,29719636-29720043,
29720394-29720558,29720742-29721036,29721131-29721345,
29721838-29722143,29722474-29722537,29722644-29722883,
29722959-29723062
Length = 1187
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
V++G + + +CG GSGKS+LL +L E P G
Sbjct: 420 VKRGMK-VAICGMVGSGKSSLLSSILGEMPKLAG 452
>01_01_0598 +
4443768-4443949,4444053-4444150,4444275-4444308,
4444629-4444780,4444871-4445051,4445707-4445887,
4446034-4446142,4446324-4446451,4446758-4446832
Length = 379
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 253 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
+ P +V+CGP +GKST + LL ++G
Sbjct: 31 EPAPPVVVVCGPKNAGKSTFSRLLLNSLLPRYG 63
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRL 324
L L GPSGSGK+TLLK L
Sbjct: 104 LALMGPSGSGKTTLLKIL 121
>03_01_0300 +
2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
V +G R + +CG GSGKS+LL +L E P G
Sbjct: 648 VVRGMR-VAVCGVIGSGKSSLLSSILGEIPKLCG 680
>02_02_0616 -
12160899-12161506,12161698-12161821,12161974-12162083,
12162119-12162271,12162545-12162779
Length = 409
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 391 EKNGVHYHFTNLNDMSTAIEKGEFIETAIFSG 486
++NG H HF N + A+ KG +E ++F+G
Sbjct: 89 QRNGHHGHFVEGNHYAEAVIKGPRLEISLFTG 120
>02_02_0492 -
10907529-10907629,10907714-10907953,10908035-10908098,
10908416-10908721,10909347-10909561,10909656-10909950,
10910493-10910597,10911112-10911180,10911433-10911519,
10911953-10913704,10914964-10915054,10915217-10915488
Length = 1198
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 339
+++G R + +CG GSGKS+LL +L E P
Sbjct: 565 IRQGMR-VAICGTVGSGKSSLLSCILGEIP 593
>02_02_0490 -
10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 339
+++G R + +CG GSGKS+LL +L E P
Sbjct: 388 IRQGMR-VAICGTVGSGKSSLLSCILGEIP 416
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1
Query: 256 KGPRPLVLCGPSGSGKSTLLKRL 324
K R L L GPSGSGK+TLL L
Sbjct: 85 KSGRLLALMGPSGSGKTTLLNVL 107
>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
Length = 612
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAP 381
L + GPSGSGKSTLL L + +V RAP
Sbjct: 72 LAVLGPSGSGKSTLLSILGGRLAGRHAGTVLAGGRAP 108
>08_01_1084 -
11120719-11120950,11121035-11121133,11122446-11122849,
11123559-11124197
Length = 457
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 535 GKICVLDIEMEGVKQIKRTDLDPLVGLCDA 624
G+IC++D+E E I TD P+ LC A
Sbjct: 221 GEICLMDLEKENFNMIYLTDY-PIFSLCQA 249
>05_06_0196 +
26293889-26294122,26294317-26294375,26294454-26294554,
26294638-26294717,26294856-26294906,26295225-26295299,
26295386-26295463,26295700-26295756,26296226-26296296,
26296395-26296494,26296574-26296678,26296763-26296825,
26296940-26297062,26297129-26297193,26297352-26297358
Length = 422
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAG 390
++L GP+GSGK TLL + L F D F ++ T +AG
Sbjct: 123 ILLIGPTGSGK-TLLAKTLARFAD-VPFVIADATAITQAG 160
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
V G R V+ GP+G+GKSTLLK L E G
Sbjct: 398 VSMGQRVAVV-GPNGAGKSTLLKLLAGELTPTSG 430
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 339
+ KG + + +CG GSGKS+LL +L E P
Sbjct: 460 IHKGMK-VAVCGAVGSGKSSLLSCVLGEMP 488
>08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 250 VQKGPRPLVLCGPSGSGKSTLLKRLLK 330
++ G R + L GPSG+GKST++ LL+
Sbjct: 1014 IEPGQR-VALVGPSGAGKSTIVSLLLR 1039
>08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 247 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
+++ G R + L GPSG+GKS++L LL+ + + G
Sbjct: 1018 VIEPGQR-VALVGPSGAGKSSVLALLLRFYDPQRG 1051
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = +1
Query: 262 PRPLVL--CGPSGSGKSTLLKRL 324
PR +V+ GPSGSGKSTLL+ L
Sbjct: 451 PRGVVVGVIGPSGSGKSTLLRAL 473
>05_03_0017 -
7392742-7393110,7393212-7393319,7393522-7394079,
7394186-7394311,7394396-7394521,7394673-7395137,
7396822-7396901,7397394-7397664
Length = 700
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 265 RPLVLCGPSGSGKSTLLKRL 324
R + + GPSGSGKSTLL L
Sbjct: 70 RVVAIMGPSGSGKSTLLDAL 89
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTT 372
+ GPSG GK+TL K LL+ + + S S TT
Sbjct: 486 IAFVGPSGGGKTTLAKLLLRLYQPQSVASWSATT 519
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRLLKE 333
L+ GPSGSGK TL+ L+K+
Sbjct: 101 LLFYGPSGSGKKTLVMALIKQ 121
>01_07_0299 + 42594363-42594424,42594516-42594798,42595185-42595409,
42596395-42596592,42596871-42597325,42597824-42597962,
42598035-42598113,42598686-42598924,42599058-42599362,
42599449-42599560,42599640-42599804,42599933-42600071,
42600111-42600219,42600733-42600823,42600940-42601064,
42601148-42601297,42601383-42601455,42601630-42601810,
42601888-42602046,42602939-42603085,42603176-42603220,
42603305-42603382,42603565-42603719,42603875-42603927,
42604012-42604090,42604271-42604357
Length = 1310
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 265 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSH 366
+ L++ GP+GSGKS++ + L D+ + +SH
Sbjct: 1140 KSLLVTGPNGSGKSSIFRVLRGTLRDQIIYPLSH 1173
>05_06_0022 +
24988363-24988453,24989102-24989325,24989433-24989494,
24990219-24990440,24990740-24990869,24991373-24991698,
24991910-24992051,24992169-24992414
Length = 480
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 256 KGPRPLVLCGPSGSGKSTLLKRLLKE 333
+ P L++ G G+GKST+LK +LKE
Sbjct: 175 RSPVLLLMGGGMGAGKSTVLKDILKE 200
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSV 360
L+ CGP+G GK+ L K L + G S+
Sbjct: 673 LIFCGPTGVGKTELTKALAASYFGSVGHSL 702
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 253 QKGPRPLVLCGPSGSGKSTLLKRLLKE 333
++ P L++ G G+GKST+LK +L+E
Sbjct: 175 ERSPVLLLMGGGMGAGKSTVLKEILQE 201
>02_05_0385 - 28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 247 MVQKGPRPLVLCGPSGSGKSTLLKRLLK 330
++ K + + L G SGSGKST+L +L+
Sbjct: 1066 LLMKAGKSMALVGMSGSGKSTVLSLILR 1093
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +1
Query: 253 QKGPRPLV-LCGPSGSGKSTLLKRLLKE---FPDKFGFSVSHTTRAPRAGEKNGVHYHFT 420
Q P P+V L G + +GKSTLL RL DK ++ TTR R KNG + T
Sbjct: 249 QSVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTR--RVLMKNGTEFLLT 306
Query: 421 N 423
+
Sbjct: 307 D 307
>11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830
Length = 160
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = +1
Query: 259 GPRPLVLCGPSGSGKSTLLKRL---LKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLN 429
GPR ++ GP+GSGKS+L+ + L P G S R E V +
Sbjct: 58 GPRLNLVLGPNGSGKSSLVCAIALALAADPGVLGRVASVGAFVKRGEESGHVKISLAGTH 117
Query: 430 DMSTAIEKGEFIETAIFSGNIYG 498
+ + +G I SG+ G
Sbjct: 118 PNTLSASRGRSIPRTSPSGSSMG 140
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1
Query: 277 LCGPSGSGKSTLLKRL 324
L GPSGSGKSTLL L
Sbjct: 106 LMGPSGSGKSTLLDAL 121
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 277 LCGPSGSGKSTLLKRL 324
+CG GSGK+TLLK+L
Sbjct: 480 ICGMGGSGKTTLLKQL 495
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 256 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDK 345
K R +L GP SGKSTL++ L + PDK
Sbjct: 195 KPSRMTLLLGPPSSGKSTLMRALTGK-PDK 223
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 265 RPLVLCGPSGSGKSTLLKRLLKEFPDKFG 351
+ + + G SGSGKST+L+ L + F G
Sbjct: 650 KSVAIVGTSGSGKSTILRLLFRFFDSSSG 678
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1
Query: 277 LCGPSGSGKSTLLKRL 324
L GPSGSGKSTLL L
Sbjct: 83 LMGPSGSGKSTLLDAL 98
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 271 LVLCGPSGSGKSTLLKRL 324
L L GPSGSGK+TLL L
Sbjct: 203 LALMGPSGSGKTTLLSIL 220
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,050,957
Number of Sequences: 37544
Number of extensions: 427439
Number of successful extensions: 1388
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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