Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_L11
         (915 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    38   4e-04
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    29   0.20 
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    28   0.45 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   4.2  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.8  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.8  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   9.8  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 37.9 bits (84), Expect = 4e-04
 Identities = 18/90 (20%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
 Frame = +2

Query: 386  KEAHYQRELDEAR-----ARATQMEKTMRWWSDCTANWREKWSKVRTERNKAREEVKALK 550
            K A +++++D         R+    K ++ W     +  +     +    + R+E++  K
Sbjct: 818  KRAEFEQQIDRINNNLEFERSKDTSKNVQRWERAVQDDEDSLETFKQAEARQRQEIEKDK 877

Query: 551  NKVEILTKELGAVKTEKNELEQQLGELRRD 640
             K+E++ +E  A KT  +++E+++ + RR+
Sbjct: 878  EKIELMKQEKAAHKTLVDQMEEEMAKARRE 907


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 455 RWWSDCTANWREKWSKVRTERNKARE 532
           +W+  C     ++W ++RTER K  E
Sbjct: 52  KWYRTCNRQINQQWKRIRTERLKTLE 77


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 0.45
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
 Frame = +2

Query: 488 EKWSKVRTERNKAREEVKALK---NKVEILTKE----LGAVKTEKNELEQQLGE 628
           EKW KVRT  N    + K +K   ++V+ + +E    +  ++ EKNEL +   +
Sbjct: 151 EKWQKVRTIVNPVMMQPKTIKLYVDQVDEIAREFMTLVAGMRDEKNELPKDFDQ 204


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +3

Query: 318  EVTDGIETTMEEAYVIQTQTGKPRRHITNENWTRHVLALPRWRRP*DGG-QTAPPTG-GR 491
            E TDG E+ M  A    +QT +PR   +    T     + RWR   +GG Q+ PP    R
Sbjct: 1400 ESTDGGES-MGTAST-SSQTDEPRPGGSGGGHTGPAGLISRWRDMEEGGRQSTPPASPAR 1457

Query: 492  SGVKCALNEIRQEKKSRH 545
                   +    +K  RH
Sbjct: 1458 LARSSPASPTPSKKSKRH 1475


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +3

Query: 483 GGRSGVKCALNEIRQEKKSRHS 548
           GG + V+C+L ++  ++++ HS
Sbjct: 236 GGEAKVRCSLYQVDPQRRAPHS 257


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 9/43 (20%), Positives = 23/43 (53%)
 Frame = +2

Query: 506 RTERNKAREEVKALKNKVEILTKELGAVKTEKNELEQQLGELR 634
           +T   + +EE++ L  K+E L K +   +  + +   ++ +L+
Sbjct: 733 QTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQ 775


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 293 SHLRCVIQNITERQAAFELYRRHIIK*VYSVI 198
           +H+    +N  +++AA E +RRH +K  YS+I
Sbjct: 724 THVSQKYRNHLQKKAA-EWFRRHKVKGFYSLI 754


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,076
Number of Sequences: 2352
Number of extensions: 15717
Number of successful extensions: 47
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)