Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_L09
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 180 1e-45
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 76 3e-14
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 68 1e-11
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 39 0.004
AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical ... 29 4.8
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 29 6.3
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 29 6.3
AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 29 6.3
AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical ... 28 8.3
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 180 bits (439), Expect = 1e-45
Identities = 88/170 (51%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Frame = +2
Query: 140 LLFTILITIINGVLSKSVELTFELPDSAEECFYQTMDKDTAASLEYQVISGGQYDVSVKI 319
+L ++++ I L S+ELTFELPD+A +CFY+ + KD E+QV++GG YDV + I
Sbjct: 1 MLKFVIVSSILVALGLSIELTFELPDNANQCFYEDLKKDVDTVFEFQVVTGGHYDVDLII 60
Query: 320 EAPNRQIIYQQEKMQYDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPL-PG 496
E PN +++Y+ K QYDS F A G YK CFSNEFSTFSHK+VYM+ G + L
Sbjct: 61 EDPNGKVLYKDTKKQYDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGDQNALHAA 120
Query: 497 VGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKV 646
V A +TQLE A I L I D+QTHHRLREA GRKRAE+LNE+V
Sbjct: 121 VTQGAHAMTQLENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERV 170
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 76.2 bits (179), Expect = 3e-14
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Frame = +2
Query: 224 EECFYQTMDKDTAASLEYQVISGGQYDVSVKIEAPNRQIIYQQEKMQYDSHQFTALASGD 403
E+CF+ + T L ++V GG D+ VKI P+ + IY+ E+ F A G
Sbjct: 28 EQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMDGV 87
Query: 404 YKVCFSNEFSTFSHKLVYMELNV-GPEQPLPG--VGDHATVLTQLETSAEEIHSALNRII 574
Y CF N+ ST + K V + + P Q PG A +LE E+ SAL +
Sbjct: 88 YTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAADNAKLEEMVRELSSALMSVK 147
Query: 575 DHQTHHRLREAQGRKRAEDLNEKV 646
Q + +RE R E+ N +V
Sbjct: 148 HEQEYMEVRERVHRNINENTNSRV 171
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Frame = +2
Query: 143 LFTILITIINGVLSKSVELTFELPDSAEECFYQTMD--KDTAASLEYQVISGGQYDVSVK 316
+ T+++ I +L + T E+P +CF+Q +D K ++YQVI GG D+++
Sbjct: 7 IITVILLITPFILCGEYDFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDGG--DLNIN 64
Query: 317 IEAPNRQIIYQQEKMQYD-SHQFTALASGDYKVCFSNEFSTFSHKLVYMEL 466
+ I +Q++++ D SH+ GDY+VCF N FS S K+V+ E+
Sbjct: 65 FMILHGANILKQDQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEI 115
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 39.1 bits (87), Expect = 0.004
Identities = 35/178 (19%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Frame = +2
Query: 152 ILITIINGVLSKSVELTFELPDSAEECFYQTMDKDTAASLEYQV------ISG-GQY--- 301
+LI +++ + + + L F + ++ ++CF + + +T + Y+V G G Y
Sbjct: 3 LLIALLS-LATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNI 61
Query: 302 DVSVKIEAPNRQIIYQQEKMQYDSHQFTALASGDYKVC-FSNEFSTF--SHKLVYMELNV 472
+ V+++ P ++I + FT+ G++ +C +SN + F + V++++
Sbjct: 62 GMHVEVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQA 121
Query: 473 GPEQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKV 646
G L +L+ ++ +++I Q + R RE + R+ +E N +V
Sbjct: 122 GDHAQDYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRV 179
>AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical
protein T08D2.1 protein.
Length = 167
Score = 29.1 bits (62), Expect = 4.8
Identities = 29/138 (21%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Frame = +2
Query: 152 ILITIINGVLSKSVELTFELPDSAEECFYQTMDKDTAASLEYQV------ISG-GQY--- 301
+LI +++ + + + L F + ++ ++CF + + +T + Y+V G G Y
Sbjct: 3 LLIALLS-LATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNI 61
Query: 302 DVSVKIEAPNRQIIYQQEKMQYDSHQFTALASGDYKVC-FSNEFSTFSHKLVYMELNVGP 478
+ V+++ P ++I + FT+ G++ +C +SN + F+ + + L++
Sbjct: 62 GMHVEVKDPEDKVILSKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDI-- 119
Query: 479 EQPLPGVGDHATVLTQLE 532
GDHA Q+E
Sbjct: 120 -----QAGDHAQDYAQVE 132
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
protein K11D9.2b protein.
Length = 1004
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 426 SLLKHTL*SPDARAVNWCESYCIFS 352
S++KHT PD RAVN + C+FS
Sbjct: 188 SVIKHTDSVPDPRAVNQDKKNCLFS 212
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
protein K11D9.2a protein.
Length = 1059
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 426 SLLKHTL*SPDARAVNWCESYCIFS 352
S++KHT PD RAVN + C+FS
Sbjct: 188 SVIKHTDSVPDPRAVNQDKKNCLFS 212
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 426 SLLKHTL*SPDARAVNWCESYCIFS 352
S++KHT PD RAVN + C+FS
Sbjct: 188 SVIKHTDSVPDPRAVNQDKKNCLFS 212
>AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical
protein Y50D7A.8 protein.
Length = 569
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +2
Query: 386 ALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETS----AEEIH 553
A A Y+ NE ++H+ +L V PE G D V TQ++ + AE
Sbjct: 142 AAARSRYQRMTENERRVYNHRRRLKQLGVDPEH---GTNDVEGVRTQMKQANAKKAEAAR 198
Query: 554 SALNRIIDHQT---HHRLREAQGRKRAED 631
+R+ Q +HR EA R+R E+
Sbjct: 199 QRYHRMTPEQKRDYNHRRTEAFRRRRHEE 227
>AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical
protein K05F6.4 protein.
Length = 390
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 454 VYGTKCWTGAASSWCRRSCNCSYTVGDICRRNSFCTQQNH 573
++ T W+ A C RS + S + D R + FCT +H
Sbjct: 18 IFNTLPWSAIAVHPCLRSWHSSNSGADSKRADVFCTTHSH 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,938,752
Number of Sequences: 27780
Number of extensions: 292884
Number of successful extensions: 1031
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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