Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_L03
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28991-4|AAK68310.1|  227|Caenorhabditis elegans Hypothetical pr...   171   8e-43
AF068709-13|AAO26012.1|  321|Caenorhabditis elegans Serpentine r...    31   1.1  
AF016415-3|AAW88418.1|  658|Caenorhabditis elegans Hypothetical ...    30   2.6  
Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U80026-3|AAC25845.2|  354|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U28991-4|AAK68310.1|  227|Caenorhabditis elegans Hypothetical
           protein F08F8.7 protein.
          Length = 227

 Score =  171 bits (415), Expect = 8e-43
 Identities = 82/150 (54%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
 Frame = +1

Query: 349 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD---VIEVCRKVREHGMKVGVAIK 519
           + FF+ H+MV  P QW+ PMA AG +Q+TFH E V     V E+  K+R+ GMKVG+++K
Sbjct: 64  EPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGLSVK 123

Query: 520 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGP 699
           PGT V  + K+ +  D  LIMTVEPGFGGQKFMEN M KV+ +R  YP L I+VDGGV P
Sbjct: 124 PGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRSKYPNLTIQVDGGVTP 183

Query: 700 STINCCANAGANMIVSGTAIIGSADQAATI 789
             I   A AGAN IVSGT II +ADQ+  +
Sbjct: 184 ENIEISAQAGANAIVSGTGIIKAADQSVAM 213



 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = +3

Query: 168 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 326
           L+  + PSILNADL+ L  E +KLL  GAD+LHLDVMDG FVPNLTFGHP  E
Sbjct: 3   LRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVE 55


>AF068709-13|AAO26012.1|  321|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 56 protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 602 PNPGSTVIIKTMSDIEIYFSTSE-TGVPGFIATPTFIPCSLTFLH 471
           P+P +  II +M  +EI FS    TG   F   P+FI  S+ FLH
Sbjct: 5   PSPPAP-IITSMETVEIEFSAKVFTGFQLFYGVPSFIIMSVLFLH 48


>AF016415-3|AAW88418.1|  658|Caenorhabditis elegans Hypothetical
           protein C02A12.8 protein.
          Length = 658

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/64 (23%), Positives = 25/64 (39%)
 Frame = -3

Query: 501 LHSVLSNFSAHFYYIFDRFYMKCVLIDSSISHWCYPLLWFLNHHVSFKKGIFYFSSKALH 322
           +H  L  +   F  I   +Y+   LI   +  W   +LW  N+  S    +   +   +H
Sbjct: 56  IHDFLRFYYRRFRRILPLYYLTIFLIVVMVHQWLPYILWDNNYRYSIASLLLITNQLVIH 115

Query: 321 XQGD 310
            Q D
Sbjct: 116 DQAD 119


>Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical
           protein T05A1.3 protein.
          Length = 747

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -1

Query: 773 SADPIMAVPETIMLAPALAQQFIVDGPTPPSTSISSNG*FSLKYCTLAI*FS 618
           ++  I ++PETI   P+L   ++ D P    +S S N    LK   L   FS
Sbjct: 488 TSSAITSIPETITKLPSLTHLYLSDNPLDQLSSTSLNHLDGLKKIRLGGNFS 539


>U80026-3|AAC25845.2|  354|Caenorhabditis elegans Hypothetical
           protein EGAP9.3 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 619 ENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGANMIVSGTAIIGSAD 774
           +N++ K +YL   +P+  I  DGG+G       +  G  M ++ TAI  S D
Sbjct: 51  KNEIDKQKYLL--FPMTAIVFDGGLGNQLFEVFSLLGLAMKLNRTAIFNSDD 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,456,794
Number of Sequences: 27780
Number of extensions: 363173
Number of successful extensions: 949
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)