Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_L02
         (916 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089689-1|AAL90427.1|  160|Drosophila melanogaster RH65975p pro...   166   3e-41
AE014296-1238|AAF50575.1|  160|Drosophila melanogaster CG4457-PA...   166   3e-41
U35682-1|AAA79181.1|  163|Drosophila melanogaster signal recogni...   144   1e-34
BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p pro...    30   3.8  
AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA...    30   3.8  
U15803-1|AAC36490.1|  674|Drosophila melanogaster InaD protein.        29   8.9  
L27653-1|AAA62385.1|  787|Drosophila melanogaster phosphofructok...    29   8.9  
BT004473-1|AAO42637.1|  674|Drosophila melanogaster RH58949p pro...    29   8.9  
AF245280-1|AAF81203.1|  674|Drosophila melanogaster INAD protein.      29   8.9  
AE013599-3488|AAF46915.1|  674|Drosophila melanogaster CG3504-PA...    29   8.9  

>AY089689-1|AAL90427.1|  160|Drosophila melanogaster RH65975p
           protein.
          Length = 160

 Score =  166 bits (404), Expect = 3e-41
 Identities = 78/137 (56%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
 Frame = +3

Query: 255 MITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGL 434
           M  +W+P  KH+D+ERWICIYPAY+N KKT  EGRRLPK  CV+NP++ EIRDVL  + L
Sbjct: 7   MKKNWSPSMKHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNL 66

Query: 435 RVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQ 614
           +  +ENK Y RE S EM +RGR+RVQ++N DG   N +FPTRES+M +I   IP+LKTRQ
Sbjct: 67  QFLMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQ 126

Query: 615 NR---PVEQQPQPTNQA 656
           N+      QQ QP + A
Sbjct: 127 NKSGDSYHQQSQPQSNA 143


>AE014296-1238|AAF50575.1|  160|Drosophila melanogaster CG4457-PA
           protein.
          Length = 160

 Score =  166 bits (404), Expect = 3e-41
 Identities = 78/137 (56%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
 Frame = +3

Query: 255 MITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGL 434
           M  +W+P  KH+D+ERWICIYPAY+N KKT  EGRRLPK  CV+NP++ EIRDVL  + L
Sbjct: 7   MKKNWSPSMKHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNL 66

Query: 435 RVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQ 614
           +  +ENK Y RE S EM +RGR+RVQ++N DG   N +FPTRES+M +I   IP+LKTRQ
Sbjct: 67  QFLMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQ 126

Query: 615 NR---PVEQQPQPTNQA 656
           N+      QQ QP + A
Sbjct: 127 NKSGDSYHQQSQPQSNA 143


>U35682-1|AAA79181.1|  163|Drosophila melanogaster signal
           recognition particle 19kDa protein protein.
          Length = 163

 Score =  144 bits (350), Expect = 1e-34
 Identities = 69/122 (56%), Positives = 87/122 (71%), Gaps = 3/122 (2%)
 Frame = +3

Query: 300 RWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVENKLYSRECSK 479
           RWICIYPAY+N KKT  EGRRLPK  CV+NP++ EIRD +  + L+  +ENK Y RE S 
Sbjct: 25  RWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDAVSVSNLQFLMENKKYCRENSS 84

Query: 480 EMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNR---PVEQQPQPTN 650
           EM +RGR+RVQ++N DG   N +FPTRES+M +I   IP+LKTRQN+      QQ QP +
Sbjct: 85  EMEFRGRVRVQLRNVDGTLYNIDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQQSQPQS 144

Query: 651 QA 656
            A
Sbjct: 145 NA 146


>BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p
           protein.
          Length = 1411

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 17/65 (26%), Positives = 37/65 (56%)
 Frame = +3

Query: 411 DVLLATGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGES 590
           D L++  +++ ++ +LY RE   E++ +   R+ + +D+G P+ P    R+   K   ++
Sbjct: 569 DKLISEDIKIELDKQLYQRESPVEVISKLVARISMIDDNG-PILPSNCVRQIQQKL--QN 625

Query: 591 IPKLK 605
           IP L+
Sbjct: 626 IPNLE 630


>AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA
           protein.
          Length = 1411

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 17/65 (26%), Positives = 37/65 (56%)
 Frame = +3

Query: 411 DVLLATGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGES 590
           D L++  +++ ++ +LY RE   E++ +   R+ + +D+G P+ P    R+   K   ++
Sbjct: 569 DKLISEDIKIELDKQLYQRESPVEVISKLVARISMIDDNG-PILPSNCVRQIQQKL--QN 625

Query: 591 IPKLK 605
           IP L+
Sbjct: 626 IPNLE 630


>U15803-1|AAC36490.1|  674|Drosophila melanogaster InaD protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 519 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 620
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


>L27653-1|AAA62385.1|  787|Drosophila melanogaster
           phosphofructokinase protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 288 SDVERWICIYPAYLNSKKTLAEGR 359
           SDV  W+    AYL SK+TL EG+
Sbjct: 463 SDVSGWVGQGGAYLGSKRTLPEGK 486


>BT004473-1|AAO42637.1|  674|Drosophila melanogaster RH58949p
           protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 519 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 620
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


>AF245280-1|AAF81203.1|  674|Drosophila melanogaster INAD protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 519 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 620
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


>AE013599-3488|AAF46915.1|  674|Drosophila melanogaster CG3504-PA
           protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 519 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 620
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,519,334
Number of Sequences: 53049
Number of extensions: 652219
Number of successful extensions: 1554
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)