Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_K22
(991 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.004
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.004
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.004
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.10
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.10
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 26 0.11
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.31
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.31
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.73
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 1.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.7
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 24 4.5
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 24 9.1
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 24 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXX 707
PPPPPPP G PPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----------PPPGGCPPPPPPP 775
Query: 708 XXXXXKKXPPPPPP 749
K PPPPPP
Sbjct: 776 PPGGFKGGPPPPPP 789
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 531 PPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPP 677
PPPPPP G PPPPP F PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = +1
Query: 529 PPPPPPXXXXXXXXXXXXXXXXXXXXXXFXXXPPPPPFFXXKKXKXPPPXXXXXXXXXXX 708
PPPPPP PPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---------PPPGGCPPPPPPPP 776
Query: 709 XXXXKKKXPPPPPP 750
K PPPPPP
Sbjct: 777 PGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXX 707
PPPPPPP G PPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----------PPPGGCPPPPPPP 775
Query: 708 XXXXXKKXPPPPPP 749
K PPPPPP
Sbjct: 776 PPGGFKGGPPPPPP 789
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 531 PPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPP 677
PPPPPP G PPPPP F PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = +1
Query: 529 PPPPPPXXXXXXXXXXXXXXXXXXXXXXFXXXPPPPPFFXXKKXKXPPPXXXXXXXXXXX 708
PPPPPP PPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---------PPPGGCPPPPPPPP 776
Query: 709 XXXXKKKXPPPPPP 750
K PPPPPP
Sbjct: 777 PGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXX 707
PPPPPPP G PPPPP PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----------PPPGGCPPPPPPP 358
Query: 708 XXXXXKKXPPPPPP 749
K PPPPPP
Sbjct: 359 PPGGFKGGPPPPPP 372
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 531 PPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPP 677
PPPPPP G PPPPP F PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = +1
Query: 529 PPPPPPXXXXXXXXXXXXXXXXXXXXXXFXXXPPPPPFFXXKKXKXPPPXXXXXXXXXXX 708
PPPPPP PPPPP PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---------PPPGGCPPPPPPPP 359
Query: 709 XXXXKKKXPPPPPP 750
K PPPPPP
Sbjct: 360 PGGFKGGPPPPPPP 373
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 6/79 (7%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXF------XXXPPPPPLFFXXKXKXPPPPXXXX 689
PPPPPPP G F PPPPP PPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 690 XXXXXXXXXXXKKXPPPPP 746
PP PP
Sbjct: 357 SAGPGMYPPPPPSRPPAPP 375
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/74 (25%), Positives = 20/74 (27%)
Frame = +1
Query: 529 PPPPPPXXXXXXXXXXXXXXXXXXXXXXFXXXPPPPPFFXXKKXKXPPPXXXXXXXXXXX 708
PPPPPP PPPPP + PP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
Query: 709 XXXXKKKXPPPPPP 750
PPPPPP
Sbjct: 377 GHGM---IPPPPPP 387
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPPXXXXXXXXXXXXXXXKKXPPPPP 746
PPPPP PP P PPPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 6/79 (7%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXF------XXXPPPPPLFFXXKXKXPPPPXXXX 689
PPPPPPP G F PPPPP PPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 690 XXXXXXXXXXXKKXPPPPP 746
PP PP
Sbjct: 367 SAGPGMYPPPPPSRPPAPP 385
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/74 (25%), Positives = 20/74 (27%)
Frame = +1
Query: 529 PPPPPPXXXXXXXXXXXXXXXXXXXXXXFXXXPPPPPFFXXKKXKXPPPXXXXXXXXXXX 708
PPPPPP PPPPP + PP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
Query: 709 XXXXKKKXPPPPPP 750
PPPPPP
Sbjct: 387 GHGM---IPPPPPP 397
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPPXXXXXXXXXXXXXXXKKXPPPPP 746
PPPPP PP P PPPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 25.8 bits (54), Expect(3) = 0.11
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 528 PPPPPPPXG 554
PPPPPPP G
Sbjct: 40 PPPPPPPCG 48
Score = 25.0 bits (52), Expect(3) = 0.11
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPP 677
PPPPP + PPPP
Sbjct: 42 PPPPPCGGGYEAPPPPPP 59
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 39 PPPPPPP 45
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPP 677
PPPPP + PPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPP 57
Score = 21.0 bits (42), Expect(3) = 0.11
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 732 PPPPPP 749
PPPPPP
Sbjct: 55 PPPPPP 60
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPPXXXXXXXXXXXXXXXKKXPPPPP 746
PPPPP+ PPPP PPPPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 625 PPPPPFFXXKKXKXPPPXXXXXXXXXXXXXXXKKKXPPPPPP 750
PPPPP PPP PPPPPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPP-PPPPPP 72
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXX 707
PPPPP G PPPPP K PPP
Sbjct: 64 PPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPP-----KGTGTPPPPPTGEPQDLS 118
Query: 708 XXXXXKKXPPPPP 746
+ PPPPP
Sbjct: 119 GEGNASRRPPPPP 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 534 PPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXXXX 713
PPPPP G PPPP PPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPP---PKGTGTPPPPPTGEPQDLSAEE 89
Query: 714 XXXKKXPPPPP 746
+ PPPPP
Sbjct: 90 GNASRRPPPPP 100
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 534 PPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXXXX 713
PPPPP G PPPP K PPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPP----PKGTGSPPPPPTGEPQDLSGE 151
Query: 714 XXXKKXPPPPP 746
+ PPPPP
Sbjct: 152 GNASRRPPPPP 162
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 534 PPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXXXX 713
PPPPP G PPPP K PPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPP----PKGTGSPPPPPTGEPQDLSTE 182
Query: 714 XXXKKXPPPPP 746
+ PPPPP
Sbjct: 183 GNASRRPPPPP 193
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 534 PPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXXXX 713
PPPPP G PPPP K PPP
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPP----PKGTGTPPPPPTGEPQDLSAE 213
Query: 714 XXXKKXPPPPP 746
+ PPPPP
Sbjct: 214 GYASRRPPPPP 224
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 534 PPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXXXX 713
PPPPP G PPPP K PPP
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPP----PKGTGSPPPPPTGEPQDLSGE 275
Query: 714 XXXKKXPPPPP 746
+ PPPPP
Sbjct: 276 GNASRRPPPPP 286
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.73
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = +3
Query: 528 PPPPPPPXG----XXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPP 677
PPPPPPP PPPPPLF PPPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +1
Query: 526 PPPPPPPXXXXXXXXXXXXXXXXXXXXXXFXXXPPPPPFFXXKKXKXPPP 675
PPPPPPP PPPPP ++ K P P
Sbjct: 1357 PPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLP 1406
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 0.96
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 5/79 (6%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXX---PPPPPLFFXXKXKXPPPPXXXXXXX 698
PPPPPP G PPPPP PPPP
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLL 562
Query: 699 XXXXXXXXK--KXPPPPPP 749
PPPPPP
Sbjct: 563 KGAVAGLKSVPGGPPPPPP 581
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 5/79 (6%)
Frame = +1
Query: 529 PPPPPPXXXXXXXXXXXXXXXXXXXXXXFXXX---PPPPPFFXXKKXKXPPPXXXXXXXX 699
PPPPPP PPPPP PPP
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLL 562
Query: 700 XXXXXXXKKKX--PPPPPP 750
K PPPPPP
Sbjct: 563 KGAVAGLKSVPGGPPPPPP 581
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPP-PPLFFXXKXKXPPPP 677
PPPPPPP PPP PP+ PPPP
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPP-PPLFFXXKXKXPPPP 677
PPPPPPP PPP PP+ PPPP
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXX 707
P P PPP PPPPPL PPPP
Sbjct: 531 PRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGG-- 588
Query: 708 XXXXXKKXPPPPPP 749
PPPPPP
Sbjct: 589 ------PPPPPPPP 596
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect(2) = 2.1
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +1
Query: 625 PPPPPFFXXKKXKXPPPXXXXXXXXXXXXXXXKKKXPPPPPP 750
PPP P+ PP +++ PPPPPP
Sbjct: 97 PPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPP 138
Score = 25.4 bits (53), Expect(2) = 1.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPP 677
PPPPP + PPPP
Sbjct: 135 PPPPPHYPPPPPHYPPPP 152
Score = 23.8 bits (49), Expect(2) = 1.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 132 PPPPPPP 138
Score = 20.6 bits (41), Expect(2) = 2.1
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 526 PPPPPPP 546
PPPPP P
Sbjct: 50 PPPPPAP 56
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPPXXXXXXXXXXXXXXXKKXPPPPP 746
PPPPPL + PPPP K PPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTL---------KAPPPPP 102
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = +3
Query: 528 PPPPPPPXG---XXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXX 698
PPPPPPP G PPPPP PPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSPPP 291
Query: 699 XXXXXXXXKKXPPPPPP 749
PPPPPP
Sbjct: 292 PRAG-----SPPPPPPP 303
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPP 674
PPPPPPP G PPPPP + PP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = +3
Query: 528 PPPPPPPXG---XXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXX 698
PPPPPPP G PPPPP PPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSPPP 312
Query: 699 XXXXXXXXKKXPPPPPP 749
PPPPPP
Sbjct: 313 PRAG-----SPPPPPPP 324
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPP 674
PPPPPPP G PPPPP + PP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = +3
Query: 528 PPPPPPPXG---XXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPPXXXXXXX 698
PPPPPPP G PPPPP PPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSPPP 297
Query: 699 XXXXXXXXKKXPPPPPP 749
PPPPPP
Sbjct: 298 PRAG-----SPPPPPPP 309
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 528 PPPPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPP 674
PPPPPPP G PPPPP + PP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 351
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/75 (28%), Positives = 23/75 (30%)
Frame = -3
Query: 749 GGGGGGXFFXXXXXXXXXXXXXXXXGGGXFXFXXKKKGGGGGXXXKXXXXXXXXXXXXXX 570
GGGGGG GGG + +GGGGG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGG 111
Query: 569 GXXXXXXXGGGGGGG 525
G GGGGG G
Sbjct: 112 GGGGQRQGGGGGGFG 126
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 534 PPPPPXGXXXXXXXXXXXXXXXXXXXFXXXPPPPPLFFXXKXKXPPPP 677
PPPP G PPPPP+F PPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF--GAPPPPPPP 120
Score = 25.8 bits (54), Expect(2) = 3.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 528 PPPPPPPXG 554
PPPPPPP G
Sbjct: 114 PPPPPPPSG 122
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 516 FXXXPPPPPP 545
F PPPPPP
Sbjct: 111 FGAPPPPPPP 120
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 476 PPPPPPP 482
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPP 677
PPPPP + PPPP
Sbjct: 478 PPPPPPPENEPEEFPPPP 495
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 478 PPPPPPP 484
Score = 23.4 bits (48), Expect(2) = 5.8
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPP 677
PPPPP + PPPP
Sbjct: 479 PPPPPPENEPEEFPPPPP 496
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 25.8 bits (54), Expect(2) = 5.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 528 PPPPPPPXG 554
PPPPPPP G
Sbjct: 905 PPPPPPPQG 913
Score = 21.4 bits (43), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 516 FXXXPPPPPPP 548
F PPPPPP
Sbjct: 900 FNPNVPPPPPP 910
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 25.8 bits (54), Expect(2) = 5.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 528 PPPPPPPXG 554
PPPPPPP G
Sbjct: 905 PPPPPPPQG 913
Score = 21.4 bits (43), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 516 FXXXPPPPPPP 548
F PPPPPP
Sbjct: 900 FNPNVPPPPPP 910
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 612 FXXXPPPPPLFFXXKXKXPPPPXXXXXXXXXXXXXXXKKXPPPPPP 749
F PPPPP+ K P P PPPPPP
Sbjct: 321 FILPPPPPPM----KLDPSPQPAATPVEITEIPPIISPPAPPPPPP 362
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPPPPXXXXXXXXXXXXXXXKKXPPPPPP 749
PPPPP PPPP + PP PP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPP 165
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +3
Query: 612 FXXXPPPPPLFFXXKXK--XPPPPXXXXXXXXXXXXXXXKKXPPPP 743
F PPPP FF + PPPP PPPP
Sbjct: 20 FFERPPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPP 65
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 23.8 bits (49), Expect(2) = 9.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 1014 PPPPPPP 1020
Score = 22.6 bits (46), Expect(2) = 9.1
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPP 671
PPPPP F PP
Sbjct: 1016 PPPPPADFFANIAPPP 1031
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 528 PPPPPPP 548
PPPPPPP
Sbjct: 253 PPPPPPP 259
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 624 PPPPPLFFXXKXKXPP 671
PPPPP F PP
Sbjct: 255 PPPPPADFFANIAPPP 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,031,287
Number of Sequences: 27780
Number of extensions: 344389
Number of successful extensions: 6195
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2969
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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