Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K21
         (1204 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   2.4  
03_06_0599 + 34984869-34985319,34986581-34987563                       29   9.6  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   9.6  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 551 PPPPXPXPXXKKKXFXSPPP 492
           PPPP P P   K  F  PPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPP 566



 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 551 PPPPXPXPXXKKKXFXSPPP 492
           PPPP P P    K   SPPP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPP 565


>03_06_0599 + 34984869-34985319,34986581-34987563
          Length = 477

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 551 PPPPXPXPXXKKKXFXSPPP 492
           PPPP P P  ++    SPPP
Sbjct: 405 PPPPPPPPHQRETPSPSPPP 424


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 551 PPPPXPXPXXKKKXFXSPPPXKK 483
           PPPP P P    +    PPP KK
Sbjct: 360 PPPPPPPPPPPPRPPPPPPPIKK 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,286,542
Number of Sequences: 37544
Number of extensions: 282098
Number of successful extensions: 5462
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3003
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3678130032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)