Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K20
         (949 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37 pro...    99   1e-20
L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37 pro...    99   1e-20
D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37 pro...    99   1e-20
CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.                99   1e-20
BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.        99   1e-20
BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37 p...    99   1e-20
AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37 p...    99   1e-20
AB007183-1|BAA25842.1|   27|Homo sapiens ribosomal protein L37 p...    35   0.38 

>S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =   99 bits (238), Expect = 1e-20
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +2

Query: 116 RRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRM 277
           RRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KAKRR TTGTGRM
Sbjct: 11  RRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRM 64



 Score = 39.5 bits (88), Expect = 0.017
 Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
 Frame = +3

Query: 282 HLKIVRRRFRNGFKEG-KPTPPKKAVASS 365
           HLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 66  HLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =   99 bits (238), Expect = 1e-20
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +2

Query: 116 RRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRM 277
           RRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KAKRR TTGTGRM
Sbjct: 11  RRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRM 64



 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEG-KPTPPKKAVASS 365
           RHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 65  RHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =   99 bits (238), Expect = 1e-20
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +2

Query: 116 RRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRM 277
           RRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KAKRR TTGTGRM
Sbjct: 11  RRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRM 64



 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEG-KPTPPKKAVASS 365
           RHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 65  RHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.
          Length = 97

 Score =   99 bits (238), Expect = 1e-20
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +2

Query: 116 RRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRM 277
           RRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KAKRR TTGTGRM
Sbjct: 11  RRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRM 64



 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEG-KPTPPKKAVASS 365
           RHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 65  RHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.
          Length = 97

 Score =   99 bits (238), Expect = 1e-20
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +2

Query: 116 RRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRM 277
           RRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KAKRR TTGTGRM
Sbjct: 11  RRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRM 64



 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEG-KPTPPKKAVASS 365
           RHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 65  RHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =   99 bits (238), Expect = 1e-20
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +2

Query: 116 RRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRM 277
           RRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KAKRR TTGTGRM
Sbjct: 11  RRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRM 64



 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEG-KPTPPKKAVASS 365
           RHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 65  RHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =   99 bits (238), Expect = 1e-20
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +2

Query: 116 RRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRM 277
           RRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KAKRR TTGTGRM
Sbjct: 11  RRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRM 64



 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEG-KPTPPKKAVASS 365
           RHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 65  RHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>AB007183-1|BAA25842.1|   27|Homo sapiens ribosomal protein L37
           protein.
          Length = 27

 Score = 35.1 bits (77), Expect = 0.38
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 227 HWSVKAKRRKTTGTGRM 277
           +WS KAKRR TTGTGRM
Sbjct: 1   NWSAKAKRRNTTGTGRM 17


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,148,935
Number of Sequences: 237096
Number of extensions: 1194609
Number of successful extensions: 7077
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7038
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)