Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K20
         (949 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    89   3e-18
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    86   3e-17
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    29   6.4  
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   8.5  
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 35/56 (62%), Positives = 44/56 (78%)
 Frame = +2

Query: 125 KTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRMPSFED 292
           K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+ RR+TTGTGR     D
Sbjct: 14  KSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLRD 69



 Score = 32.7 bits (71), Expect = 0.39
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEGKPTPPK 347
           RHL+ V  RFRNGF+EG    P+
Sbjct: 65  RHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = +2

Query: 125 KTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRMPSFED 292
           K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+ RR+TTGTGR     D
Sbjct: 14  KSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRD 69



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 279 RHLKIVRRRFRNGFKEGKPTP 341
           RHL+ V  RFRNGF+   P P
Sbjct: 65  RHLRDVNARFRNGFRGTTPKP 85


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 128 THTLCRRCGRSSYHIQKSKCAQCGYPAA 211
           TH  C +CG+ + +    KC  CG P A
Sbjct: 101 THHFCNKCGKVAQN--SKKCKHCGGPVA 126


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 117 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 224
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 128 THTLCRRCGRSSYHIQKSKCAQCGYPAA 211
           TH  C +CG+ + +    KC  CG P A
Sbjct: 173 THHFCNKCGKVAQN--SKKCKYCGGPVA 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,807,368
Number of Sequences: 27780
Number of extensions: 177876
Number of successful extensions: 1096
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)