Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_K15
(937 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical p... 37 0.024
U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical p... 37 0.024
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 33 0.22
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 32 0.68
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 32 0.68
AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 32 0.68
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 31 1.6
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 31 1.6
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 31 1.6
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 29 4.8
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 29 4.8
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 29 4.8
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 29 4.8
>U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical
protein T26A5.2b protein.
Length = 641
Score = 36.7 bits (81), Expect = 0.024
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = +1
Query: 289 ET*S*KDETIKVPHDLRNVENPS---QRPEHRDPQDYSALNERKSQDKHTENLIPNLTNS 459
ET + KD + KVP L++V P Q R Q A++ + EN++ +L N
Sbjct: 479 ETSNSKDASNKVP--LQSVSEPKILLQDTNSRCAQPRKAVSHEGLKSHQQENVLKHLDNK 536
Query: 460 HKSYGYTGIDKDESIVSQDKVAFTNDNGN-LYQSKESHSENSGTSTQDTVP-KIIYVQTD 633
HK + I K NDNGN L + EN G Q P I + TD
Sbjct: 537 HKFLCFVNIAK----------RIENDNGNPLVELSIGFDENGGKVQQSPWPLGIRMLLTD 586
Query: 634 GLQDNQLYQVAGSSGDS 684
GL+ ++ ++ G D+
Sbjct: 587 GLEKTEV-KIQGDVQDT 602
>U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical
protein T26A5.2a protein.
Length = 779
Score = 36.7 bits (81), Expect = 0.024
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = +1
Query: 289 ET*S*KDETIKVPHDLRNVENPS---QRPEHRDPQDYSALNERKSQDKHTENLIPNLTNS 459
ET + KD + KVP L++V P Q R Q A++ + EN++ +L N
Sbjct: 617 ETSNSKDASNKVP--LQSVSEPKILLQDTNSRCAQPRKAVSHEGLKSHQQENVLKHLDNK 674
Query: 460 HKSYGYTGIDKDESIVSQDKVAFTNDNGN-LYQSKESHSENSGTSTQDTVP-KIIYVQTD 633
HK + I K NDNGN L + EN G Q P I + TD
Sbjct: 675 HKFLCFVNIAK----------RIENDNGNPLVELSIGFDENGGKVQQSPWPLGIRMLLTD 724
Query: 634 GLQDNQLYQVAGSSGDS 684
GL+ ++ ++ G D+
Sbjct: 725 GLEKTEV-KIQGDVQDT 740
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = +1
Query: 310 ETIKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQD--KHTENLIPN-LTNSHKSYGYT 480
E V ++N +Q QD+ ++ K +D + T +P L
Sbjct: 640 EKQNVQQSKSQLQNHTQNQSQNQSQDHEKNSKTKPKDPKQGTRLFVPKALRKEADDLPAN 699
Query: 481 GIDKDESIVSQDKVAFTNDNGNLYQSKESHSE--NSGTSTQDTVPKIIYVQTDG 636
G+ +S+ +++K+A NG++++S E +S T T+PK + + +G
Sbjct: 700 GLLSPQSVETKEKIAAAKSNGDVFKSDEQSKGFWDSLTPEVSTIPKKMTKKPEG 753
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 346 ENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 525
E+PS+ H DP++ ++E + + + N +L N S G+D ++ + +V
Sbjct: 159 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 216
Query: 526 FTN----DNGNLYQSKESHSENSG-TSTQDTV 606
+N +NG S +S + G TS+ TV
Sbjct: 217 DSNEATAENGTSSSSSRKNSRDDGLTSSPTTV 248
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 346 ENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 525
E+PS+ H DP++ ++E + + + N +L N S G+D ++ + +V
Sbjct: 37 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 94
Query: 526 FTN----DNGNLYQSKESHSENSG-TSTQDTV 606
+N +NG S +S + G TS+ TV
Sbjct: 95 DSNEATAENGTSSSSSRKNSRDDGLTSSPTTV 126
>AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical
protein C09E7.10 protein.
Length = 208
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +1
Query: 325 PHDLRNVENPSQRPEHR--DPQDYSALNERKSQDKHTENLI--PNLTNSHKSYGYTGIDK 492
P NV ++P+ + DP + L E +D H +I + + H YG T DK
Sbjct: 62 PEKENNVTLEKEKPKQKLIDPSTFITLKENDWRDAHEGRMIIWSHESQHHPDYGKTFTDK 121
Query: 493 DESIVSQDK 519
D Q K
Sbjct: 122 DRYTYRQSK 130
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 352 PSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 522
P Q ++ + YSA + K T N+I HK G++ + +DE ++ + +
Sbjct: 344 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 400
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 352 PSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 522
P Q ++ + YSA + K T N+I HK G++ + +DE ++ + +
Sbjct: 299 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 355
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 352 PSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 522
P Q ++ + YSA + K T N+I HK G++ + +DE ++ + +
Sbjct: 394 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 450
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 DLRNVENPSQRPEHRDPQDYSA-LNERKSQDKHTENLIPNLTNSH 462
D P + + Q+ + L RK+ DK LIPNLT H
Sbjct: 729 DFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 DLRNVENPSQRPEHRDPQDYSA-LNERKSQDKHTENLIPNLTNSH 462
D P + + Q+ + L RK+ DK LIPNLT H
Sbjct: 729 DFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 DLRNVENPSQRPEHRDPQDYSA-LNERKSQDKHTENLIPNLTNSH 462
D P + + Q+ + L RK+ DK LIPNLT H
Sbjct: 729 DFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 DLRNVENPSQRPEHRDPQDYSA-LNERKSQDKHTENLIPNLTNSH 462
D P + + Q+ + L RK+ DK LIPNLT H
Sbjct: 677 DFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 721
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 DLRNVENPSQRPEHRDPQDYSA-LNERKSQDKHTENLIPNLTNSH 462
D P + + Q+ + L RK+ DK LIPNLT H
Sbjct: 729 DFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical
protein R07B1.3 protein.
Length = 536
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +1
Query: 331 DLRNVENPSQ------RPEHRDPQDYSAL-NERKSQDKHTENLIPNLTNSHKSYGYTGID 489
+L NV NP + +PE + Y+ L +E+K + + + ++K Y Y+ +D
Sbjct: 70 NLFNVTNPDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVD 129
Query: 490 KDESIVSQDKVAFTN 534
D DK+ F N
Sbjct: 130 NDAGYNYNDKIMFPN 144
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 DLRNVENPSQRPEHRDPQDYSA-LNERKSQDKHTENLIPNLTNSH 462
D P + + Q+ + L RK+ DK LIPNLT H
Sbjct: 729 DFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 DLRNVENPSQRPEHRDPQDYSA-LNERKSQDKHTENLIPNLTNSH 462
D P + + Q+ + L RK+ DK LIPNLT H
Sbjct: 676 DFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,102,850
Number of Sequences: 27780
Number of extensions: 325212
Number of successful extensions: 878
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -