Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K14
         (1019 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         31   2.0  
02_01_0016 + 110796-110979,111252-111768,111847-112213                 29   4.5  
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380...    29   7.9  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +2

Query: 170 PPXKKXW-PQXGVPQXFKKPXKXPPXPXXGPTPP*XXFWAP 289
           PP +  W P    P    KP   PP P   P  P   +W P
Sbjct: 275 PPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQPSQRYWTP 315


>02_01_0016 + 110796-110979,111252-111768,111847-112213
          Length = 355

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = +2

Query: 206 PQXFKKPXKXPPXPXXGPTPP*XXFWAPFXKKGPXFWXXSPP 331
           P     P   PP P   P PP    W    ++ P  W  +PP
Sbjct: 168 PSPIPTPIIAPP-PVSSPAPPLPPLWRRRPRRLPPIWRPTPP 208


>10_08_0254 +
           16236689-16236793,16237760-16237808,16237988-16238076,
           16238178-16238234,16238684-16238746,16238828-16238893,
           16239520-16239606,16239691-16239784,16240351-16240673,
           16241022-16241048,16241065-16241145,16241445-16241476,
           16242126-16242266,16242455-16242516,16243170-16243387
          Length = 497

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
 Frame = +2

Query: 131 QXFXPI-FGSKXFXPPXKKXWPQXGVPQXFKKPXKXPPXPXXGPTPP 268
           Q F P+    +   PP     P    PQ   +P   PP P   P PP
Sbjct: 262 QQFPPMQMNGQPVWPPQNTQLPPHMPPQMHYRPAVRPPPPNMMPPPP 308


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,112,249
Number of Sequences: 37544
Number of extensions: 154332
Number of successful extensions: 263
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 3010688180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)