Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K13
         (896 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021215-1|AAH21215.1|  442|Homo sapiens chromosome 5 open readi...   109   2e-23
AK002055-1|BAA92060.1|  442|Homo sapiens protein ( Homo sapiens ...   109   2e-23

>BC021215-1|AAH21215.1|  442|Homo sapiens chromosome 5 open reading
           frame 22 protein.
          Length = 442

 Score =  109 bits (261), Expect = 2e-23
 Identities = 47/106 (44%), Positives = 64/106 (60%)
 Frame = +2

Query: 425 KRFDKIPIYVVEEHNDALQFIYSAIGGKKLPVEGTTLLHLDAHPDMLIDRKLKGEEARSG 604
           +R+ K+P++VVE+H + L FIY AIG K LP    + LH D+HPD+LI   +  +     
Sbjct: 12  RRYPKLPVWVVEDHQEVLPFIYRAIGSKHLPASNVSFLHFDSHPDLLIPVNMPADTVFDK 71

Query: 605 RNLLPLLQIENWIVPAVSAGHINRVLWLRXPWAKQITDGSRVINVG 742
             L   L IENWI+PAV AGH + V+W    WA+QI +G     VG
Sbjct: 72  ETLFGELSIENWIMPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVG 117


>AK002055-1|BAA92060.1|  442|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11193 fis, clone PLACE1007621. ).
          Length = 442

 Score =  109 bits (261), Expect = 2e-23
 Identities = 47/106 (44%), Positives = 64/106 (60%)
 Frame = +2

Query: 425 KRFDKIPIYVVEEHNDALQFIYSAIGGKKLPVEGTTLLHLDAHPDMLIDRKLKGEEARSG 604
           +R+ K+P++VVE+H + L FIY AIG K LP    + LH D+HPD+LI   +  +     
Sbjct: 12  RRYPKLPVWVVEDHQEVLPFIYRAIGSKHLPASNVSFLHFDSHPDLLIPVNMPADTVFDK 71

Query: 605 RNLLPLLQIENWIVPAVSAGHINRVLWLRXPWAKQITDGSRVINVG 742
             L   L IENWI+PAV AGH + V+W    WA+QI +G     VG
Sbjct: 72  ETLFGELSIENWIMPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVG 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,776,437
Number of Sequences: 237096
Number of extensions: 2396411
Number of successful extensions: 3854
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3854
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)