Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K13
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12017-7|CAH19088.1|  856|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z12017-6|CAE47469.1|  734|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z12017-5|CAA78052.2|  859|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF036692-5|AAS47681.1|  319|Caenorhabditis elegans Serpentine re...    30   2.0  
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z12017-7|CAH19088.1|  856|Caenorhabditis elegans Hypothetical
           protein R08D7.6c protein.
          Length = 856

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 379 FNLNYPTDKSILEFLPSVP*FRKIRRP 299
           +++  PT   +LE LP VP  RK+ RP
Sbjct: 107 YDIEEPTSSGLLELLPDVPIVRKLSRP 133


>Z12017-6|CAE47469.1|  734|Caenorhabditis elegans Hypothetical
           protein R08D7.6b protein.
          Length = 734

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 379 FNLNYPTDKSILEFLPSVP*FRKIRRP 299
           +++  PT   +LE LP VP  RK+ RP
Sbjct: 110 YDIEEPTSSGLLELLPDVPIVRKLSRP 136


>Z12017-5|CAA78052.2|  859|Caenorhabditis elegans Hypothetical
           protein R08D7.6a protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 379 FNLNYPTDKSILEFLPSVP*FRKIRRP 299
           +++  PT   +LE LP VP  RK+ RP
Sbjct: 110 YDIEEPTSSGLLELLPDVPIVRKLSRP 136


>AF036692-5|AAS47681.1|  319|Caenorhabditis elegans Serpentine
           receptor, class x protein13 protein.
          Length = 319

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 514 QFFPSYCRINELQGIIVFFNNINWYLVKSF---RWYIFFC*NF 395
           +FF   C    LQGI+ F+   N+Y V +    +WY+FF   F
Sbjct: 240 RFFMQSC----LQGILFFYEIFNFYYVSTLNTNQWYVFFTATF 278


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -3

Query: 444 GILSNLLDGTFFFVKISDIM----VILISITLLTRAFLNFYP 331
           G+LS  + G+F F K+  I+    + L SI+L T  ++  YP
Sbjct: 337 GLLSMFVIGSFMFCKLGTIVQPRFIYLFSISLFTMLYIVTYP 378


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,574,914
Number of Sequences: 27780
Number of extensions: 395503
Number of successful extensions: 845
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)