Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_K04
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.11
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.11
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.11
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.11
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.11
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.11
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 0.21
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.35
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.35
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 0.35
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 0.36
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 32 0.46
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 0.60
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 0.60
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 26 0.77
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 2.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 27 3.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 26 5.0
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 5.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 7.4
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 24 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = +1
Query: 454 PPXGGGGXPXXGGKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXX 633
PP G P GG PP PPPPP PPPPG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-----G 767
Query: 634 XXXXXXXXXXXXXXXXXPPPPPP 702
PPPPPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = +1
Query: 454 PPXGGGGXPXXGGKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXX 633
PP G P GG PP PPPPP PPPPG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-----G 767
Query: 634 XXXXXXXXXXXXXXXXXPPPPPP 702
PPPPPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = +1
Query: 454 PPXGGGGXPXXGGKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXX 633
PP G P GG PP PPPPP PPPPG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-----G 350
Query: 634 XXXXXXXXXXXXXXXXXPPPPPP 702
PPPPPP
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 520 SPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXXXXXXXXXXXXXXXXXXXPPPPP 699
SPP PPPPP PPPP G PPPPP
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP---TGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 700 P 702
P
Sbjct: 303 P 303
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 454 PPXGGGGXPXXG-GKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPP 609
PP G P G G SPP PPPPP PPP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 520 SPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXXXXXXXXXXXXXXXXXXXPPPPP 699
SPP PPPPP PPPP G PPPPP
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP---TGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 700 P 702
P
Sbjct: 324 P 324
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 454 PPXGGGGXPXXG-GKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPP 609
PP G P G G SPP PPPPP PPP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 520 SPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXXXXXXXXXXXXXXXXXXXPPPPP 699
SPP PPPPP PPPP G PPPPP
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP---TGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 700 P 702
P
Sbjct: 309 P 309
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 454 PPXGGGGXPXXG-GKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPP 609
PP G P G G SPP PPPPP PPP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect(2) = 0.21
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 545 NPPPPPXXXKXXXXXKKKXPPPP 613
+PPPPP K PPPP
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPP 143
Score = 23.8 bits (49), Expect(2) = 0.21
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 523 PPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXXXXXXXXXXXXXXXXXXXPPPPP 699
PP PPPPP PPPPG PPPPP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPPXXXXXXXXXXXXXXXXXXXXXXXP---PPPPPP 703
PPPPP PPPP P PPPPPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 523 PPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXXXXXXXXXXXXXXXXXXXPPPPP 699
PP PPPPP PPPPG PPPPP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPPXXXXXXXXXXXXXXXXXXXXXXXP---PPPPPP 703
PPPPP PPPP P PPPPPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.1 bits (57), Expect(2) = 0.35
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2
Query: 521 PXXXXFXKNPPPPPXXXKXXXXXKKKXPPPP 613
P K+PPPPP PPPP
Sbjct: 480 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 510
Score = 23.8 bits (49), Expect(2) = 0.35
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 506 PPPPPPP 512
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.1 bits (57), Expect(2) = 0.36
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2
Query: 521 PXXXXFXKNPPPPPXXXKXXXXXKKKXPPPP 613
P K+PPPPP PPPP
Sbjct: 487 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 517
Score = 23.8 bits (49), Expect(2) = 0.36
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 512 PPPPPPP 518
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 517 FSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPG 615
F+PP PPPPP PPPPG
Sbjct: 785 FTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPG 817
Score = 23.8 bits (49), Expect(2) = 4.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 808 PPPPPPP 814
Score = 23.0 bits (47), Expect(2) = 4.7
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = +2
Query: 602 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPP 700
PPPP PPPPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 517 FSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPG 615
F+PP PPPPP PPPPG
Sbjct: 785 FTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPG 817
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 808 PPPPPPP 814
Score = 23.0 bits (47), Expect(2) = 4.6
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = +2
Query: 602 PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPP 700
PPPP PPPPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +1
Query: 514 FFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXXXXXXXXXXXXXXXXXXXPP- 690
FF PP PPPP F + PPPP G PP
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPF--MPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPF 352
Query: 691 -PPPP 702
PPPP
Sbjct: 353 FPPPP 357
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +1
Query: 514 FFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPPGXXXGXXXXXXXXXXXXXXXXXXXPP- 690
FF PP PPPP F + PPPP G PP
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPF--MPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPF 352
Query: 691 -PPPP 702
PPPP
Sbjct: 353 FPPPP 357
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 25.8 bits (54), Expect(2) = 0.77
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPP 613
PPPPP ++ PPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPP 88
Score = 24.6 bits (51), Expect(2) = 1.7
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPP 613
PPPPP + PPPP
Sbjct: 68 PPPPPPPPLISILQQAPPPPPP 89
Score = 24.6 bits (51), Expect(2) = 1.7
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPP 613
PPPPP PPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPPPP 91
Score = 23.8 bits (49), Expect(2) = 0.77
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 84 PPPPPPP 90
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 85 PPPPPPP 91
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 86 PPPPPPP 92
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 87 PPPPPPP 93
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPP 613
PPPPP PPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPP 90
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 4/56 (7%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPP----PPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPP 703
PPP P K K PP PP PPPPPPP
Sbjct: 512 PPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPP 567
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 2/54 (3%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKX--PPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPP 703
PPPPP PPPP PPPPPPP
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPPP 703
PPPPP PPPP PPPPPPP
Sbjct: 538 PPPPPPVGMANGGP----PPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = +2
Query: 545 NPPPPPXXXKXXXXXKKKXPPPP---XXXXXXXXXXXXXXXXXXXXXXXPPPPPP 700
NPPPPP PPPP PPPPPP
Sbjct: 502 NPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 451 TPPXGGGGXPXXGGKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKKXPPPP 612
T P G G P GG + P PPPPP + PPPP
Sbjct: 63 TMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPP------PHYYTQPPPPP 110
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.1 bits (57), Expect(2) = 3.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPP 613
PPPPP K PPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPP 176
Score = 20.6 bits (41), Expect(2) = 3.0
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 683 PPPPPPP 703
P PPPPP
Sbjct: 171 PTPPPPP 177
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.1 bits (57), Expect(2) = 3.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPP 613
PPPPP K PPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPP 176
Score = 20.6 bits (41), Expect(2) = 3.0
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 683 PPPPPPP 703
P PPPPP
Sbjct: 171 PTPPPPP 177
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = +1
Query: 418 GXGGFNNKKXXTPPXGGGGXPXXGGKKKXXXFFFSPPXXFXXKPPPPPFXXKXXXXXXKK 597
G GG N P GG P GG + P + PPPPP + +
Sbjct: 60 GFGGNNYNNGPPPFDGGYNRPYGGGGGGG----YGRPQGYVPPPPPPPTQPEPEPEPRPE 115
Query: 598 XPPPP 612
P P
Sbjct: 116 PQPEP 120
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 26.2 bits (55), Expect(2) = 5.0
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2
Query: 521 PXXXXFXKNPPPPPXXXKXXXXXKKKXPPPP 613
P + + PPPPP PPPP
Sbjct: 123 PAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
Score = 20.6 bits (41), Expect(2) = 5.0
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPP P
Sbjct: 149 PPPPPAP 155
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPPPP 700
PPPPP K P P PPPPPP
Sbjct: 135 PPPPPPAAAAAAPISPKAAPTPQSPAPNRVPHYRQTSTASVSSTIPPPPPP 185
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -1
Query: 703 GGGGGGGXXXXXXXXXXXXXXXXXXXXPXXRGGGGFFFXXXXXFXXXRGGGG 548
GGGGGGG GGGGF + GGGG
Sbjct: 153 GGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGG 204
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 23.8 bits (49), Expect(2) = 8.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 683 PPPPPPP 703
PPPPPPP
Sbjct: 500 PPPPPPP 506
Score = 22.2 bits (45), Expect(2) = 8.2
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +2
Query: 548 PPPPPXXXKXXXXXKKKXPPPP 613
PP PP + PPPP
Sbjct: 484 PPSPPALPPALPNPNEPPPPPP 505
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,380,781
Number of Sequences: 27780
Number of extensions: 333370
Number of successful extensions: 4567
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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