Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K02
         (1035 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   3.5  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   3.5  
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643...    29   6.0  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 646  GGXXXPPPPXKXXGGGGXPP 705
            GG   PPPP +  GG G PP
Sbjct: 1180 GGVAPPPPPPRGHGGVGGPP 1199



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/51 (29%), Positives = 15/51 (29%)
 Frame = -2

Query: 797  PPPPXXXXXXXXXXXXPXXXXXXXXXXXXXXGGXPPPPXXXXGGGGXXXPP 645
            PPPP            P              GG  PPP    G GG   PP
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPP 1199


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/53 (28%), Positives = 15/53 (28%)
 Frame = -3

Query: 796 PPPPXXXXXGXXXPXXXXXXXXXXXXXGXXXGXXPPPPXFXXGGGXXXPPPXK 638
           PPPP         P                 G  PPPP    G     PPP K
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPFK 402


>02_02_0059 -
           6432945-6433115,6433975-6434061,6434585-6434787,
           6435281-6435392,6435473-6435517,6435622-6435726,
           6435946-6435996,6436026-6436103,6437258-6437313,
           6437784-6437853,6438288-6438392,6438525-6438637,
           6439354-6439534,6439635-6440390
          Length = 710

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -1

Query: 714 GXXGGXP-PPPXXFXXGGGXXXPPP 643
           G   G P PPP  F  GGG   PPP
Sbjct: 69  GMLHGEPYPPPDRFGYGGGRGYPPP 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,512,259
Number of Sequences: 37544
Number of extensions: 510040
Number of successful extensions: 1246
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3047748156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)