Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_K01
(921 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 38 0.051
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 38 0.051
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 38 0.051
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 38 0.051
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 37 0.12
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 37 0.12
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 37 0.12
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 37 0.12
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 37 0.12
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 37 0.12
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 36 0.16
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 36 0.16
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 36 0.16
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 36 0.16
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 36 0.16
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 36 0.16
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 36 0.21
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 35 0.36
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 35 0.36
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 35 0.36
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 35 0.36
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 35 0.36
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 35 0.36
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 34 0.63
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 33 1.9
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 33 1.9
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 33 1.9
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 33 1.9
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 33 1.9
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 33 1.9
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 33 1.9
L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen ... 33 1.9
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 33 1.9
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 33 1.9
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 33 1.9
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 33 1.9
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 33 1.9
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 33 1.9
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 33 1.9
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.9
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.9
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 33 1.9
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 33 1.9
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 33 1.9
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 33 1.9
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 33 1.9
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 31 4.5
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 31 4.5
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 37.9 bits (84), Expect = 0.051
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPL-XPGXXGL-GXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP PL PG GL G G Q GE GF K G
Sbjct: 765 PPGERGLPGPQGPNGFPGPKGPLGPPGKDGLPGHPG----QRGEVGFQGKTG 812
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 37.9 bits (84), Expect = 0.051
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPL-XPGXXGL-GXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP PL PG GL G G Q GE GF K G
Sbjct: 786 PPGERGLPGPQGPNGFPGPKGPLGPPGKDGLPGHPG----QRGEVGFQGKTG 833
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 37.9 bits (84), Expect = 0.051
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPL-XPGXXGL-GXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP PL PG GL G G Q GE GF K G
Sbjct: 872 PPGERGLPGPQGPNGFPGPKGPLGPPGKDGLPGHPG----QRGEVGFQGKTG 919
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 37.9 bits (84), Expect = 0.051
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPL-XPGXXGL-GXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP PL PG GL G G Q GE GF K G
Sbjct: 786 PPGERGLPGPQGPNGFPGPKGPLGPPGKDGLPGHPG----QRGEVGFQGKTG 833
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 36.7 bits (81), Expect = 0.12
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 758 PPGERGLPGPQGPNGFPGPKGP--PGPPGKDGLPGHPGQRGEVGFQGKTG 805
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 36.7 bits (81), Expect = 0.12
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 786 PPGERGLPGPQGPNGFPGPKGP--PGPPGKDGLPGHPGQRGEVGFQGKTG 833
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 36.7 bits (81), Expect = 0.12
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 786 PPGERGLPGPQGPNGFPGPKGP--PGPPGKDGLPGHPGQRGEVGFQGKTG 833
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 36.7 bits (81), Expect = 0.12
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 786 PPGERGLPGPQGPNGFPGPKGP--PGPPGKDGLPGHPGQRGEVGFQGKTG 833
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 36.7 bits (81), Expect = 0.12
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 872 PPGERGLPGPQGPNGFPGPKGP--PGPPGKDGLPGHPGQRGEVGFQGKTG 919
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 36.7 bits (81), Expect = 0.12
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 786 PPGERGLPGPQGPNGFPGPKGP--PGPPGKDGLPGHPGQRGEVGFQGKTG 833
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 36.3 bits (80), Expect = 0.16
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PPG R GP GFP P PG G Q GE GF K G
Sbjct: 796 PGPPGERGPQGPQGPVGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 845
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 36.3 bits (80), Expect = 0.16
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PPG R GP GFP P PG G Q GE GF K G
Sbjct: 912 PGPPGERGPQGPQGPVGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 961
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 36.3 bits (80), Expect = 0.16
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PPG R GP GFP P PG G Q GE GF K G
Sbjct: 873 PGPPGERGPQGPQGPVGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 922
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 36.3 bits (80), Expect = 0.16
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PPG R GP GFP P PG G Q GE GF K G
Sbjct: 924 PGPPGERGPQGPQGPVGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 973
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 36.3 bits (80), Expect = 0.16
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PPG R GP GFP P PG G Q GE GF K G
Sbjct: 912 PGPPGERGPQGPQGPVGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 961
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 36.3 bits (80), Expect = 0.16
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PPG R GP GFP P PG G Q GE GF K G
Sbjct: 123 PGPPGERGPQGPQGPVGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 172
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 35.9 bits (79), Expect = 0.21
Identities = 23/53 (43%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXG-LGXXGXXXPQXGEXGFPXKXG 916
P PPG R GP GFP P PG G +G G Q GE GF K G
Sbjct: 912 PGPPGERGPQGPQGPVGFPGPKGP--PGPPGRMGCPGHPG-QRGETGFQGKTG 961
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 944 PPGERGPNGPQGPTGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 991
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 944 PPGERGPNGPQGPTGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 991
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 944 PPGERGPNGPQGPTGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 991
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 944 PPGERGPNGPQGPTGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 991
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 944 PPGERGPNGPQGPTGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 991
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R GP+GFP P PG G Q GE GF K G
Sbjct: 898 PPGERGPNGPQGPTGFPGPKGP--PGPPGKDGLPGHPGQRGETGFQGKTG 945
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 34.3 bits (75), Expect = 0.63
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
PPG R G +GFP P PG G Q GE GF K G
Sbjct: 143 PPGERGLPGPSGSNGFPGPKGP--PGPPGKDGLPGHPGQRGEVGFQGKXG 190
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 253 PKGKKGSKGEPGPKGFPGLRGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 299
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 254 PKGKKGSKGEPGPKGFPGLRGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 300
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 254 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 300
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 770
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 771 LGPK-GDRGFPGPPG 784
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 770
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 771 LGPK-GDRGFPGPPG 784
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 770
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 771 LGPK-GDRGFPGPPG 784
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 633 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 689
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 690 LGPK-GDRGFPGPPG 703
>L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen
protein.
Length = 542
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 254 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 300
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 249 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 295
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 253 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 299
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 322 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 378
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 379 LGPK-GDRGFPGPPG 392
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 254 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 300
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 253 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 299
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 254 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 300
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 253 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 299
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 770
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 771 LGPK-GDRGFPGPPG 784
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 770
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 771 LGPK-GDRGFPGPPG 784
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 254 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 300
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 253 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 299
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 695 PFXFPGFXGEVWEVFSWX*XNRPXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGL-GXXGX 871
P FPG G + PPG F GP G P P PG GL G G
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFP---GPKGEPGFALPGPPGPPGLPGFKGA 770
Query: 872 XXPQXGEXGFPXKXG 916
P+ G+ GFP G
Sbjct: 771 LGPK-GDRGFPGPPG 784
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 254 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 300
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +2
Query: 767 PPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P G + GP GFP P PG GLG G + GE G P G
Sbjct: 253 PKGKKGSKGEPGPKGFPGISGP--PGFPGLGTTGEKG-EKGEKGIPGLPG 299
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PG + GP GFP P PG G Q GE GF + G
Sbjct: 862 PGIPGEKGLPGLQGPPGFPGPKGP--PGHQGKDGRPGHPGQRGELGFQGQTG 911
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +2
Query: 761 PXPPGXRXFXXXGGPSGFPXXXNPLXPGXXGLGXXGXXXPQXGEXGFPXKXG 916
P PG + GP GFP P PG G Q GE GF + G
Sbjct: 775 PGIPGEKGLPGLQGPPGFPGPKGP--PGHQGKDGRPGHPGQRGELGFQGQTG 824
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,037,758
Number of Sequences: 237096
Number of extensions: 2088136
Number of successful extensions: 5068
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4953
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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