Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_J24
(913 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 94 2e-20
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 91 3e-19
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 90 4e-19
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 82 1e-16
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 80 4e-16
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 80 4e-16
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 78 2e-15
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 73 4e-14
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 64 3e-11
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 64 3e-11
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 63 6e-11
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 58 2e-09
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 58 2e-09
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 57 3e-09
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 54 3e-08
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 52 9e-08
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 50 3e-07
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 49 1e-06
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 48 1e-06
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 40 4e-04
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 39 9e-04
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 33 0.074
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 30 0.40
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 30 0.52
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 28 2.1
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 27 3.7
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 27 3.7
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 27 3.7
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 27 4.9
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 26 6.5
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 26 8.5
SPCC1494.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 8.5
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 26 8.5
SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|c... 26 8.5
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 26 8.5
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 26 8.5
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 94.3 bits (224), Expect = 2e-20
Identities = 46/103 (44%), Positives = 67/103 (65%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
LGV++ A+++EI+KAYR+L +WHPDKNP N +EA +F EI++A+EVLSD +R++YD
Sbjct: 12 LGVSKDASESEIRKAYRQLTKQWHPDKNPGN-EEAQEKFIEINKAHEVLSDPEQRKIYDA 70
Query: 365 YGKEGLNNGRGRRSAADEDYEFGYASFPFTFRDPEEVFREFFG 493
YG+EGLN G + G+ F F ++F FG
Sbjct: 71 YGEEGLNGQPGGPGGGPGE---GFPGGGFGFDPFGDIFDNIFG 110
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 90.6 bits (215), Expect = 3e-19
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
LG++ AT +IKKAYRKLA+K+HPDKNPD+ A+ +F++ISEAY+VL DE+ R YDQ
Sbjct: 13 LGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQ 72
Query: 365 YGKEGLNNGRGRRSAAD 415
+GKE +G A D
Sbjct: 73 FGKEKAVPEQGFTDAYD 89
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 90.2 bits (214), Expect = 4e-19
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
L V TA+ E+KKAYRKLALK+HPDKNP+ D +FKEIS AYE+L+DE KR YD+
Sbjct: 11 LNVDVTASQAELKKAYRKLALKYHPDKNPNAGD----KFKEISRAYEILADEEKRATYDR 66
Query: 365 YGKEGLNNGRGRRSAADEDYEFGYASF 445
+G+EGL G + +D +ASF
Sbjct: 67 FGEEGLQGGGADGGMSADDL---FASF 90
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 81.8 bits (193), Expect = 1e-16
Identities = 53/124 (42%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
L V A++ E+KKAYRKLALK+HPDKNP+ ++FKEIS AYEVLSD ++R++YDQ
Sbjct: 11 LEVRPEASEAELKKAYRKLALKYHPDKNPNGE----KKFKEISLAYEVLSDPQRRKLYDQ 66
Query: 365 YG-KEGLNNGRGRRSAADEDYEFGYASFP---------FTFRDPEEVFREFFGASSFGDL 514
YG EG N A+ G+ FP F F +FF AS D+
Sbjct: 67 YGITEG--NAAPPPPGAEGGPGAGFGGFPGAGPGGARTFHFNMGGPGGAQFFSASDPNDI 124
Query: 515 FAEI 526
F +
Sbjct: 125 FERV 128
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 80.2 bits (189), Expect = 4e-16
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
LGV+++A+ +EIK AY KLA ++HPD NPD + A +F EI +AYEVL D +K++ +D
Sbjct: 91 LGVSKSASASEIKSAYYKLAKQYHPDANPDKA--AQDKFVEIKQAYEVLQDPKKKKAFDT 148
Query: 365 YGKEGLNNGRGRRSAADEDYEFGYA-SFPFTFRDPEEVFREFFGASSFG 508
YG NG E ++ G+A + F+ P F + FG SS G
Sbjct: 149 YGAGAFKNGE-FTGGDFEGFQNGFAGASSFSSGFPGFNFEDLFGFSSRG 196
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 80.2 bits (189), Expect = 4e-16
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
L + +T TDTEIKK+Y+KLAL+ HPDKN ++ A+ FK +S+A++VLSD R YD+
Sbjct: 118 LDLKKTCTDTEIKKSYKKLALQLHPDKN--HAPSADEAFKMVSKAFQVLSDPNLRAHYDR 175
Query: 365 YGKEGLNNGRGRRS--AADEDYEFGYASFPFTFRDPEEVFREFFGASSF 505
G + + S +++ G++++P PE++F FFG F
Sbjct: 176 TGMDPESRASAASSSFSSNAGGHPGFSAYPQANMSPEDLFNSFFGDQFF 224
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 78.2 bits (184), Expect = 2e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYD 361
LGV++ ATD EIKKAYRKLAL +HPDKN N EA RFKE+ EAY +LSD RR +D
Sbjct: 354 LGVSKEATDIEIKKAYRKLALVYHPDKNAGNL-EAEARFKEVGEAYTILSDPESRRRFD 411
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 73.3 bits (172), Expect = 4e-14
Identities = 42/115 (36%), Positives = 60/115 (52%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
L ++ A IKK+YR+LA+ +HPDKN +N + A +F++++EAY+VLSD + R YD+
Sbjct: 14 LNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYDK 73
Query: 365 YGKEGLNNGRGRRSAADEDYEFGYASFPFTFRDPEEVFREFFGASSFGDLFAEIN 529
GK G G F D E F+ FG SF D E+N
Sbjct: 74 LGKVGAVPDAG-------------------FEDAFEFFKNLFGGDSFRDYVGELN 109
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 64.1 bits (149), Expect = 3e-11
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 167 WTTTGXLGVTRTATDTEIKKAYRKLALKWHPDKNP-DNSDEANRRFKEISEAYEVLSDER 343
W LG+ + AT +IK++Y +L+ +HPD++ D A +F+ I AYEVLSD
Sbjct: 7 WELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPS 66
Query: 344 KRRVYDQYGKEGL 382
K+ +YD +G++GL
Sbjct: 67 KKEIYDNFGEQGL 79
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 63.7 bits (148), Expect = 3e-11
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 203 ATDTEIKKAYRKLALKWHPDKNP-DNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEG 379
A+ EIKK+Y++LAL HPDK P +EA RF+ + EAY++L D R +YD YG
Sbjct: 17 ASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESREMYDMYGMNS 76
Query: 380 LNNGR 394
+N +
Sbjct: 77 DSNSQ 81
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 62.9 bits (146), Expect = 6e-11
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
L + + AT +I+K Y LAL++HPD+NP + + A +RF+ + A+EVLSD KR +YDQ
Sbjct: 17 LKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLIYDQ 76
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 57.6 bits (133), Expect = 2e-09
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYD 361
LG+ A D EI +A+RK +LK+HPDKNP N +A +F + AY L D + R+ YD
Sbjct: 14 LGINEDAQDQEIHRAWRKTSLKYHPDKNP-NDPKAAEKFHMLQLAYNALIDVQLRKAYD 71
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 57.6 bits (133), Expect = 2e-09
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSD--EANRRFKEISEAYEVLSDERKRRVY 358
LGV + A+D I++AYRK AL+ HPD+ D EA F +++ AY VLSD+++R+ Y
Sbjct: 36 LGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRRKHY 95
Query: 359 DQYGK 373
D+ G+
Sbjct: 96 DKTGQ 100
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 57.2 bits (132), Expect = 3e-09
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
LG T++ EI++ Y KL L++HPD+NP E +F+ I +A+EVL D + R ++DQ
Sbjct: 17 LGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRELFDQ 76
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 54.0 bits (124), Expect = 3e-08
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDK-NPDNSDEANRRFKEISEAYEVLSDERKRRVYD 361
L +T A+ EIK AY+K AL+ HPD+ +P A +F+ ++EAY VLSD +R YD
Sbjct: 9 LNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRAQYD 68
Query: 362 Q 364
+
Sbjct: 69 R 69
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 52.4 bits (120), Expect = 9e-08
Identities = 23/50 (46%), Positives = 37/50 (74%)
Frame = +2
Query: 215 EIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
EIK YRKLAL++HPD+NP ++ N F +I+ AY +LS++ KR+ +++
Sbjct: 24 EIKANYRKLALQYHPDRNP-GIEDYNEIFSQINAAYNILSNDDKRKWHEK 72
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 50.4 bits (115), Expect = 3e-07
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = +2
Query: 167 WTTTGXLGVTRTATDTEIKKAYRKLALKWHPDK--NPDNS--DEANRRFKEISEAYEVLS 334
W LG+ + + ++++ Y++L++K+HPDK N N+ +E + + EI+ AY L+
Sbjct: 97 WDPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALT 156
Query: 335 DERKRRVYDQYG 370
D++ R Y YG
Sbjct: 157 DDKTRENYALYG 168
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 48.8 bits (111), Expect = 1e-06
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +2
Query: 137 EPLEGETQRWWTTTGXLGVTRTATDTE-IKKAYRKLALKWHPDKNPDNSD-EANRRFKEI 310
+P E + Q + G L R DTE IKKA+ K LK HPDK + + + FK I
Sbjct: 89 DPKEWKQQDHYAVLG-LSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCI 147
Query: 311 SEAYEVLSDERKRRVYD 361
+AYE+LSD +RR +D
Sbjct: 148 QKAYEILSDPVRRRQFD 164
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 48.4 bits (110), Expect = 1e-06
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +2
Query: 197 RTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVY 358
+T TD EIK+AYRK L +HPDK + ++ EAY+VLS E+ R+ Y
Sbjct: 13 KTYTDDEIKEAYRKALLLFHPDKCKEKPSVV-YTIDQVKEAYQVLSSEKDRQQY 65
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 40.3 bits (90), Expect = 4e-04
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQ 364
L V A+ EI +AYRK ++ +HPDKNP ++ + + +L + R+ YD
Sbjct: 45 LEVPTKASIKEINRAYRKKSILYHPDKNP----KSKELYTLLGLIVNILRNTETRKRYDY 100
Query: 365 YGKEGLNNGRG 397
+ K G +G
Sbjct: 101 FLKNGFPRWKG 111
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 39.1 bits (87), Expect = 9e-04
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Frame = +2
Query: 185 LGVTRTATDTEIKKAYRKLALKWHPDKNPDNSD--------EANRR----FKEISEAYEV 328
L + RT T +IK+ Y +L K HPDK + S E N+ F+ + A +
Sbjct: 37 LELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAANAL 96
Query: 329 LSDERKRRVYDQYG 370
LSD+R+R YD++G
Sbjct: 97 LSDKRRREEYDRFG 110
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 32.7 bits (71), Expect = 0.074
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 215 EIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYD 361
+I+ YRK +L HPDKN DN A+ F + +A L +++ R D
Sbjct: 46 DIRNLYRKKSLMIHPDKNRDNPKAAD-AFDILKKAESDLVNDKIRESLD 93
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2
Query: 191 VTRTATDTEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYG 370
V + +T + +A+ KLAL NP++ +R + + +A E+L + R +
Sbjct: 232 VYNVSNNTLLSEAHYKLALALE-FTNPEDPSNKSRACEHVEKAAEILKNVLNERENEVTD 290
Query: 371 KEGLNNGRGRRSAADEDYE 427
K+G + S D E
Sbjct: 291 KKGKGKQKAEESTLTSDLE 309
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 248 KWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNN 388
K H N +N+++A+ + VLS++ +V D GKEG ++
Sbjct: 7 KLHRSSNSENTNQASPSTIQSHSTQPVLSNDHSTKVNDYEGKEGASS 53
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 450 SHSEIPK--KYSENSLVPHLSG-IYLLKSMVTDTIRG 551
+H IP KY+ENSL+P + G Y + +++ T +G
Sbjct: 1119 NHDTIPLIVKYAENSLIPTVRGTAYFVLGLISRTSKG 1155
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = +2
Query: 212 TEIKKAYRKLALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNG 391
T I+K + K ++P A R K + AYE + +++ + +NNG
Sbjct: 957 TNIRKTQERNIRKRAMKRDPAKPSSAQPR-KTFASAYEAAVYDTDDEAEEEFENDEMNNG 1015
Query: 392 RGRRSAADEDY 424
G DE +
Sbjct: 1016 NGGDLRMDEAF 1026
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 628 GRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNV 807
GR RS R F RQR+ H ++ + +++++ R+N+V
Sbjct: 605 GRKFRSFLRRSYDTFQRNLHEPDDERQREPTLGHIESSIENHRPRYSRQNSESHLRENSV 664
Query: 808 LRKRGSKVKTVNGVPQS 858
R+R +V T G +S
Sbjct: 665 ERRRREQVLTNIGDSES 681
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 447 HSHSEIPKKYSENSLVPHLSGIYLLKSMVTDTIRGTVDEV 566
H ++IP+ YS L H S +Y + TD + GT+ ++
Sbjct: 498 HICTQIPEDYSPKFLSQHESFVYKQQPPSTDDLYGTMKKL 537
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 300 SKKFLKLMRFFQMRENAECMTSTARKD*ITEEVVALPQTRTTNLAMQASHSHSE 461
S F RFF + + + S K I E V +PQ R N A+ A H +
Sbjct: 18 SSSFKIRWRFFSVSYASRKLASEDNKPSIQEVVRGIPQNRVRNWAVIAHIDHGK 71
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +1
Query: 673 LDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESH-----RERTRDNNVLRKRGSKVKT 837
+ + + A G + H H + +++ + +++S R++ +D NV RKR +K +
Sbjct: 301 IKITEDAMGGKVLYHSHVHKSKEEIKQQDNFHEQSRALKEKRKKEQDENVRRKRENKKRR 360
Query: 838 VNGVPQSLTYSN 873
+ + +T SN
Sbjct: 361 KDQKKEGITSSN 372
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 314 EAYEVLSDERKRRVYDQYGKEGLNNGRGRRSAADEDY 424
+ +EVLS ++ + +G +G +NG G A DY
Sbjct: 414 DIFEVLSTGNEKMIPTLHGSQGSSNGNG-GGAGSSDY 449
>SPCC1494.03 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 234 LYAFFISVSVAV-RVTPSXPVVVHHRC 157
L+ +IS ++ + R TPS P VVH +C
Sbjct: 25 LFRNYISEALELLRETPSSPTVVHEQC 51
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = +2
Query: 188 GVTRTATDTEIKKAYRKL---ALKWHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVY 358
GV +T+ +++ A L +K ++ D AN E+ + S +RR
Sbjct: 137 GVVEFSTEEDMRNALTSLNGEVIKGQAVTLREDPDAANEPLPEVPSRFRSRSPPARRRYR 196
Query: 359 DQYGKEGLNNGRGRRSAADEDYEF 430
D Y + G R D++ +
Sbjct: 197 DDYRRGGDYRRDAYRPGRDDERRY 220
>SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 610 VRDAGAGRHIRSHEREHVHVFLDLQQFA 693
+ D G H HE E VH+ L + FA
Sbjct: 191 IEDWGNLHHAGDHEEETVHIHLTISLFA 218
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 664 HVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDH 765
H L+ F Q EE H ++ Q K+DH
Sbjct: 324 HPSLNRSPFTLATNSMQEEEEHLKASFAQNKRDH 357
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 408 PQTRTTNLAMQASHSHSEIPKKYSENSLVPHLSGIY 515
PQ T+L + H I K+S +VP GIY
Sbjct: 825 PQITKTSLNREKPALHGSINLKHSTRPVVPIADGIY 860
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,282,787
Number of Sequences: 5004
Number of extensions: 63678
Number of successful extensions: 285
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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