Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J19
         (910 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28727-1|AAC50543.1| 1627|Homo sapiens pregnancy-associated plas...    31   7.6  

>U28727-1|AAC50543.1| 1627|Homo sapiens pregnancy-associated plasma
           protein-A preproform protein.
          Length = 1627

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +3

Query: 54  LGQRSGXVPGXPRATRPPQHVAGVAWARCAGRRRP-ATSLGLWTGRATDVTRLDDSRPDK 230
           L +R       PRA RPP+  AG A     G R P   +     GRA +  R+   R  +
Sbjct: 21  LAERPRRARRDPRAGRPPRPAAGPATCATRGPRPPRLAAAAAAAGRAWEAVRVPRRRQQR 80

Query: 231 RA 236
            A
Sbjct: 81  EA 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,803,537
Number of Sequences: 237096
Number of extensions: 1657905
Number of successful extensions: 7811
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7811
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)