Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J18
         (827 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.5  
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714...    30   2.6  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   3.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.0  
03_05_0067 - 20460206-20460703,20461255-20461530                       28   7.9  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -1

Query: 827  PPPXGGXXXXXXXP-PAXXFXXGGXPPPPP 741
            PPP GG       P P      GG PPPPP
Sbjct: 1124 PPPIGGLGGHQAPPAPPLPEGIGGVPPPPP 1153



 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/59 (30%), Positives = 18/59 (30%)
 Frame = -1

Query: 827  PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXPXXXXXXXXGGGGXXXXXXXXXXXXPP 651
            PPP GG       PP   F  GG PPP              G GG            PP
Sbjct: 1151 PPPVGGLGGPPAPPPPAGF-RGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208


>03_02_0786 -
           11169820-11170158,11170245-11170433,11171173-11171469,
           11171568-11171630,11171884-11171997,11173011-11173091,
           11173176-11173307,11174265-11174363,11174453-11174530,
           11174641-11174901
          Length = 550

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPP 741
           PPP  G       PP       G PPPPP
Sbjct: 30  PPPPMGPPPPPPMPPVPVMYLRGVPPPPP 58


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +1

Query: 742 GGGGGXPPXKKXXAGGXXXXXXXPPXGG 825
           GGGGG PP     AGG        P GG
Sbjct: 111 GGGGGGPPSLPPGAGGGGGARPPAPGGG 138



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +1

Query: 742 GGGGGXPPXKKXXAGGXXXXXXXPPXGG 825
           GGGGG  P +    GG       PP GG
Sbjct: 137 GGGGGGAPRRVLGGGGGGGALARPPGGG 164


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPP 741
           PPP  G       PP      GG PPPPP
Sbjct: 356 PPPPKGPSPPPPPPPGGK--KGGPPPPPP 382


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 786 PXPXFFXXGXPPPPPR 739
           P P +F  G PPPPP+
Sbjct: 16  PPPQYFQAGPPPPPPQ 31


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,056,892
Number of Sequences: 37544
Number of extensions: 440855
Number of successful extensions: 1669
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)