Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J18
         (827 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    32   2.2  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    31   5.1  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    31   5.1  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    31   5.1  

>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/45 (33%), Positives = 15/45 (33%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXPXXXXXXXXGGGG 693
           PPP          PP      GG PPPPP   P        G  G
Sbjct: 39  PPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPGPPPPPFTGADG 83


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXP 729
           PPP          PP      GG PPPPP   P
Sbjct: 367 PPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPP 399



 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXPXXXXXXXXGGGG 693
           PPP          PP      G  PPPPP   P        G  G
Sbjct: 368 PPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADG 412


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXP 729
           PPP          PP      GG PPPPP   P
Sbjct: 367 PPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPP 399



 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXPXXXXXXXXGGGG 693
           PPP          PP      G  PPPPP   P        G  G
Sbjct: 368 PPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADG 412


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXP 729
           PPP          PP      GG PPPPP   P
Sbjct: 367 PPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPP 399



 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = -1

Query: 827 PPPXGGXXXXXXXPPAXXFXXGGXPPPPPXXXPXXXXXXXXGGGG 693
           PPP          PP      G  PPPPP   P        G  G
Sbjct: 368 PPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADG 412


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,478,901
Number of Sequences: 237096
Number of extensions: 2034702
Number of successful extensions: 5428
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3774
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)