Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J17
         (925 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001427-1|AAH01427.2|  364|Homo sapiens solute carrier family 3...    79   2e-14
AK027747-1|BAB55339.1|  246|Homo sapiens protein ( Homo sapiens ...    79   2e-14
AK027394-1|BAB55080.1|  364|Homo sapiens protein ( Homo sapiens ...    79   2e-14
AK002182-1|BAA92126.1|  351|Homo sapiens protein ( Homo sapiens ...    79   2e-14
AF326199-1|AAK51705.1|  364|Homo sapiens GDP-fucose transporter ...    79   2e-14
AF323970-1|AAK50397.1|  364|Homo sapiens GDP-fucose transporter ...    79   2e-14

>BC001427-1|AAH01427.2|  364|Homo sapiens solute carrier family 35,
           member C1 protein.
          Length = 364

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +1

Query: 424 FVNKTLFSSQTVALEAPLFITWFQCIISFSICFTLSQNGGV-PGIFSFPKGTPWSMDVMK 600
           F+NK L  S ++ L+ P+F+T++QC+++  +C  LS      PG   FP      + V +
Sbjct: 57  FLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPS-LRLDLRVAR 115

Query: 601 KVIPLAIMYTLMIATNNLCLKHVGVPFYYVGR 696
            V+PL++++  MI  NNLCLK+VGV FY VGR
Sbjct: 116 SVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 147


>AK027747-1|BAB55339.1|  246|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14841 fis, clone OVARC1002158. ).
          Length = 246

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +1

Query: 424 FVNKTLFSSQTVALEAPLFITWFQCIISFSICFTLSQNGGV-PGIFSFPKGTPWSMDVMK 600
           F+NK L  S ++ L+ P+F+T++QC+++  +C  LS      PG   FP      + V +
Sbjct: 57  FLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPS-LRLDLRVAR 115

Query: 601 KVIPLAIMYTLMIATNNLCLKHVGVPFYYVGR 696
            V+PL++++  MI  NNLCLK+VGV FY VGR
Sbjct: 116 SVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 147


>AK027394-1|BAB55080.1|  364|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14488 fis, clone MAMMA1002844, weakly similar to
           TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, NON-GREEN
           PLASTID ).
          Length = 364

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +1

Query: 424 FVNKTLFSSQTVALEAPLFITWFQCIISFSICFTLSQNGGV-PGIFSFPKGTPWSMDVMK 600
           F+NK L  S ++ L+ P+F+T++QC+++  +C  LS      PG   FP      + V +
Sbjct: 57  FLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPS-LRLDLRVAR 115

Query: 601 KVIPLAIMYTLMIATNNLCLKHVGVPFYYVGR 696
            V+PL++++  MI  NNLCLK+VGV FY VGR
Sbjct: 116 SVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 147


>AK002182-1|BAA92126.1|  351|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11320 fis, clone PLACE1010321. ).
          Length = 351

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +1

Query: 424 FVNKTLFSSQTVALEAPLFITWFQCIISFSICFTLSQNGGV-PGIFSFPKGTPWSMDVMK 600
           F+NK L  S ++ L+ P+F+T++QC+++  +C  LS      PG   FP      + V +
Sbjct: 44  FLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPS-LRLDLRVAR 102

Query: 601 KVIPLAIMYTLMIATNNLCLKHVGVPFYYVGR 696
            V+PL++++  MI  NNLCLK+VGV FY VGR
Sbjct: 103 SVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 134


>AF326199-1|AAK51705.1|  364|Homo sapiens GDP-fucose transporter
           protein.
          Length = 364

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +1

Query: 424 FVNKTLFSSQTVALEAPLFITWFQCIISFSICFTLSQNGGV-PGIFSFPKGTPWSMDVMK 600
           F+NK L  S ++ L+ P+F+T++QC+++  +C  LS      PG   FP      + V +
Sbjct: 57  FLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPS-LRLDLRVAR 115

Query: 601 KVIPLAIMYTLMIATNNLCLKHVGVPFYYVGR 696
            V+PL++++  MI  NNLCLK+VGV FY VGR
Sbjct: 116 SVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 147


>AF323970-1|AAK50397.1|  364|Homo sapiens GDP-fucose transporter
           protein.
          Length = 364

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +1

Query: 424 FVNKTLFSSQTVALEAPLFITWFQCIISFSICFTLSQNGGV-PGIFSFPKGTPWSMDVMK 600
           F+NK L  S ++ L+ P+F+T++QC+++  +C  LS      PG   FP      + V +
Sbjct: 57  FLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPS-LRLDLRVAR 115

Query: 601 KVIPLAIMYTLMIATNNLCLKHVGVPFYYVGR 696
            V+PL++++  MI  NNLCLK+VGV FY VGR
Sbjct: 116 SVLPLSVVFIGMITFNNLCLKYVGVAFYNVGR 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,239,460
Number of Sequences: 237096
Number of extensions: 1985903
Number of successful extensions: 6635
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6629
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)