Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J16
         (1014 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-P...    25   3.9  
AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-P...    25   4.0  
BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p pro...    30   5.8  
AE014298-2790|AAF48905.2|  437|Drosophila melanogaster CG7349-PA...    30   5.8  
AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-P...    30   5.8  

>AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-PB,
           isoform B protein.
          Length = 968

 Score = 25.4 bits (53), Expect(2) = 3.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 407 PPPPXXPPPXKK 442
           PPPP  PPP +K
Sbjct: 634 PPPPPPPPPPRK 645



 Score = 23.4 bits (48), Expect(2) = 3.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 254 GGGGVXXPPPPXX*XPP 304
           GGGG    PPP    PP
Sbjct: 626 GGGGAVPRPPPPPPPPP 642


>AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-PA,
           isoform A protein.
          Length = 858

 Score = 25.4 bits (53), Expect(2) = 4.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 407 PPPPXXPPPXKK 442
           PPPP  PPP +K
Sbjct: 524 PPPPPPPPPPRK 535



 Score = 23.4 bits (48), Expect(2) = 4.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 254 GGGGVXXPPPPXX*XPP 304
           GGGG    PPP    PP
Sbjct: 516 GGGGAVPRPPPPPPPPP 532


>BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p
           protein.
          Length = 1312

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 374 FFXXXKXXXXXPPPPXXPPPXKKXPP 451
           FF         PPPP  PPP  + PP
Sbjct: 330 FFNAMAMAYHLPPPPPPPPPDSRSPP 355


>AE014298-2790|AAF48905.2|  437|Drosophila melanogaster CG7349-PA
           protein.
          Length = 437

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 407 PPPPXXPPPXKKXPP 451
           PPPP  PPP K  PP
Sbjct: 165 PPPPPPPPPAKSAPP 179


>AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-PA
           protein.
          Length = 1311

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 374 FFXXXKXXXXXPPPPXXPPPXKKXPP 451
           FF         PPPP  PPP  + PP
Sbjct: 329 FFNAMAMAYHLPPPPPPPPPDSRSPP 354


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,688,548
Number of Sequences: 53049
Number of extensions: 384527
Number of successful extensions: 5649
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3845
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5160759156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)