Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_J14
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 85 7e-17
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 85 7e-17
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 81 1e-15
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 70 2e-12
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 52 7e-07
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 1.1
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 4.5
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 85.0 bits (201), Expect = 7e-17
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +1
Query: 361 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 540
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 541 KIDDGTVRRDELFIMGKLWSTFH 609
+D+G V+R+ELFI K+W+TFH
Sbjct: 62 ILDEGKVKREELFITSKVWNTFH 84
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 85.0 bits (201), Expect = 7e-17
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +1
Query: 361 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 540
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 541 KIDDGTVRRDELFIMGKLWSTFH 609
+D+G V+R+ELFI K+W+TFH
Sbjct: 62 ILDEGKVKREELFITSKVWNTFH 84
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 81.0 bits (191), Expect = 1e-15
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +1
Query: 364 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 543
A++KL +G MPVI LGT P V+TA+ GYR IDTA +Y NE+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 544 IDDGTVRRDELFIMGKLWS 600
+++G V+R+ELFI K W+
Sbjct: 66 LEEGVVKREELFITTKAWT 84
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 630 GLQDSLADLGLEFFDLFLIHNPMSLKE 710
GL++SL L LE+ DL+L H P + +
Sbjct: 95 GLRESLKKLQLEYVDLYLAHMPAAFND 121
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +1
Query: 367 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 546
T+ L G MPVI GT LP L E V A++ GYR ID+A + N++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 547 DDGTVRRDELFIMGKLWSTFH 609
VRR+ELF+ K+W+T+H
Sbjct: 66 KIRKVRREELFLSSKIWNTYH 86
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 361 VATLKLRDGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 537
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y NE +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 538 NKIDDGTVRRDELFIMGKLWSTFH 609
I G ++R+++F+ KL T H
Sbjct: 63 EYISSGKLKREDIFVTSKLPFTAH 86
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 62.1 bits (144), Expect = 5e-10
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +1
Query: 262 GKQKRDTGDLTDEQYKTRIAE-LNEAKLKGSVKEVATLKLRDGTFMPVIALGTALLPPRL 438
G+ G+ +D+ + + L ++ LK S + + L L + MP + LGT
Sbjct: 12 GRSSNSDGNASDDGHPPALTPILLKSYLKNSDAK-SHLTLSNAHSMPAVGLGTWQSNAED 70
Query: 439 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 618
V+ A+ GY IDTA Y NE+ IG AIK I +G V+R++LFI K+ + F
Sbjct: 71 VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDLFITTKVPNLFSSLR 130
Query: 619 LV 624
LV
Sbjct: 131 LV 132
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/94 (35%), Positives = 49/94 (52%)
Frame = +1
Query: 358 EVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 537
+V L +G MP I LGT + ++ A+ GYR IDTA +Y NE IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 538 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACR 639
+G ++R+++FI K + D+VE A R
Sbjct: 64 ELFAEGILKREDIFITTKAFCHEVAPDVVEEALR 97
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 627 DGLQDSLADLGLEFFDLFLIHNPMSLKE 710
+ L++SL L L++ DL+L H P S K+
Sbjct: 94 EALRNSLKRLRLDYVDLYLAHIPASTKD 121
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +1
Query: 367 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 546
++KL G P+I LGT + +++ A+ GYR DTA +Y NEK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 547 DDGTVRRDELFIMGKL 594
++R+++FI K+
Sbjct: 62 PKHNLKREDIFITTKM 77
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 373 KLRDGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 549
K DG MP I LG + + + ++ +E A+ GYR DTA +Y NE +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 550 DGTVRRDELFIMGKLWSTFHRTDLVET 630
+ R+++FI K+ T + + ET
Sbjct: 73 QFGLTREDVFITTKV-RTLNENTVEET 98
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +1
Query: 361 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 540
+ T L + MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 541 KIDDGTVRRDELFIMGKLW 597
+V R+E+F+ KLW
Sbjct: 62 ----CSVPREEMFLSTKLW 76
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = +1
Query: 373 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 552
KL++G +P +ALGT V+ A+ +GYR+ DTA Y NEK +G A+K +
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62
Query: 553 GTVRRDELFIMGKLW 597
+ +++++ K++
Sbjct: 63 HNICSEDIYLTSKVF 77
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 394 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 570
MP+I +GT + + ++++ GYR IDTA +Y NE IG+ ++ + ++R+
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 571 ELFIMGKL 594
+++I KL
Sbjct: 71 DIWITSKL 78
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = +1
Query: 373 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 552
KL G +P + GT + ++ A+ GYR DTA Y NEK +G+A+K +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 553 GTVRRDELFIMGKLWSTFHRTDLVETACR 639
+ R ++F+ K F + ACR
Sbjct: 74 HGLSRSDVFLTSKF---FPESKNCREACR 99
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 445 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 534
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 615 GAMECTPQFTHNEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSSLHYFR 442
G QFT + + GA+ +VL + L +S +++++AH+ SS FR
Sbjct: 422 GDAHINSQFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 597 EYIPSHRSGGDGLQDSLADLGLEFFDLFLIHNPMSLKE 710
E P G L+DSL L LE+ DL+L H P + +
Sbjct: 56 ELAPGRLEGA--LRDSLKKLHLEYVDLYLAHMPTAFSD 91
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 671 RPLPHPQSDVVEGRHSSIPKISSVIQYSEFDYXDXVV--TTVHRLPGP 808
+P+P SDV IP ++ + EF + + T+HR P P
Sbjct: 273 KPIPTAVSDVSTASSIPIPNVTGAAEILEFPEEEKKIDMATIHRTPTP 320
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 671 RPLPHPQSDVVEGRHSSIPKISSVIQYSEFDYXDXVV--TTVHRLPGP 808
+P+P SDV IP ++ + EF + + T+HR P P
Sbjct: 273 KPIPTAVSDVSTASSIPIPNVTGAAEILEFPEEEKKIDMATIHRTPTP 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,171,917
Number of Sequences: 27780
Number of extensions: 362042
Number of successful extensions: 1172
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -