Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J12
         (918 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    31   4.4  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    31   4.4  
AY686878-1|AAW67359.1|  132|Homo sapiens random intestinal-homin...    31   7.7  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 668 GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFY 507
           GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y
Sbjct: 581 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSY 634


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 668 GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFY 507
           GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y
Sbjct: 582 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSY 635


>AY686878-1|AAW67359.1|  132|Homo sapiens random intestinal-homing
           antibody heavy chain variable region protein.
          Length = 132

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 605 LSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWXFAGLLLTCS 468
           LS    +D +V +C ARQ GG    + A  P+Y  +   G L+T S
Sbjct: 87  LSSVTAADTAVYYC-ARQIGGRIADSSAPTPYYFDYWGQGTLVTVS 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,375,766
Number of Sequences: 237096
Number of extensions: 2053519
Number of successful extensions: 6099
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6099
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)