Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J09
         (999 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.66 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.7  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 0.66
 Identities = 19/72 (26%), Positives = 23/72 (31%)
 Frame = +2

Query: 503 VSGXPXVXGGSPVXXXXGGXPRAPXPGXPXGXHAAXAPRXXGGXXPFFPWXXPPXGXAPP 682
           + G P + G +       G P AP P  P G      P+   G    F       G   P
Sbjct: 390 IPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDG----FDGEKGERGQMGP 445

Query: 683 XGRXPXGGVPPP 718
            G     G P P
Sbjct: 446 KGGQGVPGRPGP 457



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 741 PXXXPPRXGCXPXXPSLSXPPGXXXGPXPXPGPP 842
           P   P R G  P  P ++ P G   G    PG P
Sbjct: 381 PKGEPGRDGI-PGQPGIAGPAGAPGGGEGRPGAP 413


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 20/63 (31%), Positives = 22/63 (34%)
 Frame = +2

Query: 572 PXPGXPXGXHAAXAPRXXGGXXPFFPWXXPPXGXAPPXGRXPXGGVPPPXXGXFXGXRXX 751
           P PG   G   A  P   G   P  P   P  G  PP    P  G+PP   G        
Sbjct: 87  PRPGMIPGMPGAP-PLLMGPNGPLPP---PMMGMRPPPMMVPTMGMPPMGLGMRPPVMSA 142

Query: 752 SPP 760
           +PP
Sbjct: 143 APP 145


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 717 GGGTPPXGXRPXGGAXPXGGXXXG 646
           GGG P  G    GG  P GG   G
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGG 231


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 963 GAXGRXXRGGGXGGXRXGXAGP 898
           G  G    GGG GG   G AGP
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGP 314


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 963 GAXGRXXRGGGXGGXRXGXAGP 898
           G  G    GGG GG   G AGP
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGP 314


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 963 GAXGRXXRGGGXGGXRXGXAGP 898
           G  G    GGG GG   G AGP
Sbjct: 245 GGVGGGGGGGGGGGGGGGSAGP 266


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -2

Query: 845 GGRAXXGXRSRXXPRGXGQGGXXXXAPXPGG 753
           GGR   G R     RG G+GG        GG
Sbjct: 67  GGRGGRGGRGGGRGRGRGRGGRDGGGGFGGG 97


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
 Frame = +2

Query: 557 GXPRAPXP---GXPXGXHAAXAPRXXGGXXPFFPWXXPPXGXAPPXGRXPXGGVPPP 718
           G PR P P   G P G      P          P   P     PP G    GG PPP
Sbjct: 296 GPPRPPMPMQGGAPGGPPQGMRPNFYNR-----PMGDPQTSR-PPSGNDNMGGGPPP 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,020
Number of Sequences: 2352
Number of extensions: 9393
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 109763433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)