Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J04
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   1.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.5  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +2

Query: 389 NPEDIIAVGVTNQRETTIVWEQGTGKPLYNAIVWLDMRT 505
           N  + +A G+T Q+ T   + +  G P++  +V++ M++
Sbjct: 171 NRYETVAHGMTVQKTTLFFFNRTFGVPIFLVLVFVQMQS 209


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 193 CPYQRPKFTELA 158
           CP  RP FTEL+
Sbjct: 734 CPKNRPTFTELS 745


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 487 NNCVVQRFPCALLPNYSCFSLVC 419
           NNC V   P  +LPN+     +C
Sbjct: 94  NNCDVIEKPRKVLPNFKTDEPIC 116


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 541 KQNKKQKLPKAIMWSSTLT 597
           + N   K+P  I+WSS L+
Sbjct: 442 RANNGVKIPLVIIWSSNLS 460


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,952
Number of Sequences: 336
Number of extensions: 5336
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)